Gene : Brara.K01613 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  1
Name:  ? Brara.K01613 Secondary Identifier:  ? PAC:30620107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01613 0.5kb upstream 0.5kb upstream 9069 true Scaffold77952: 784-9852 Brassica rapa FPsc
Brara.K01613 0.5kb upstream 0.5kb upstream 500 false Scaffold77952: 9353-9852 Brassica rapa FPsc
Brara.K01613 0.5kb downstream 0.5kb downstream 9069 true Scaffold77952: 284-9352 Brassica rapa FPsc
Brara.K01613 0.5kb downstream 0.5kb downstream 500 false Scaffold77952: 284-783 Brassica rapa FPsc
Brara.K01613 1.0kb upstream 1.0kb upstream 9569 true Scaffold77952: 784-10352 Brassica rapa FPsc
Brara.K01613 1.0kb upstream 1.0kb upstream 1000 false Scaffold77952: 9353-10352 Brassica rapa FPsc
Brara.K01613 1.0kb downstream 1.0kb downstream 9352 true Scaffold77952: 1-9352 Brassica rapa FPsc
Brara.K01613 1.0kb downstream 1.0kb downstream 783 false Scaffold77952: 1-783 Brassica rapa FPsc
Brara.K01613 2.0kb upstream 2.0kb upstream 10569 true Scaffold77952: 784-11352 Brassica rapa FPsc
Brara.K01613 2.0kb upstream 2.0kb upstream 2000 false Scaffold77952: 9353-11352 Brassica rapa FPsc
Brara.K01613 2.0kb downstream 2.0kb downstream 9352 true Scaffold77952: 1-9352 Brassica rapa FPsc
Brara.K01613 2.0kb downstream 2.0kb downstream 783 false Scaffold77952: 1-783 Brassica rapa FPsc
Brara.K01613 5.0kb upstream 5.0kb upstream 13569 true Scaffold77952: 784-14352 Brassica rapa FPsc
Brara.K01613 5.0kb upstream 5.0kb upstream 5000 false Scaffold77952: 9353-14352 Brassica rapa FPsc
Brara.K01613 5.0kb downstream 5.0kb downstream 9352 true Scaffold77952: 1-9352 Brassica rapa FPsc
Brara.K01613 5.0kb downstream 5.0kb downstream 783 false Scaffold77952: 1-783 Brassica rapa FPsc
Brara.K01613 10.0kb upstream 10.0kb upstream 18569 true Scaffold77952: 784-19352 Brassica rapa FPsc
Brara.K01613 10.0kb upstream 10.0kb upstream 10000 false Scaffold77952: 9353-19352 Brassica rapa FPsc
Brara.K01613 10.0kb downstream 10.0kb downstream 9352 true Scaffold77952: 1-9352 Brassica rapa FPsc
Brara.K01613 10.0kb downstream 10.0kb downstream 783 false Scaffold77952: 1-783 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365062 5261 Brassicaceae View MSA
123827558 5264 Brassicales-Malvales View MSA
124343658 5266 SBM View MSA
124242097 5268 Malvidae View MSA
124071999 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier