Gene : Brara.K01645 B. rapa FPsc v1.3
Defline:  (1 of 1) KOG0964//KOG4421//KOG4674 - Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) // Uncharacterized conserved protein // Uncharacterized conserved coiled-coil protein Genomic Order:  11
Name:  ? Brara.K01645 Secondary Identifier:  ? PAC:30623371
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01645 0.5kb upstream 0.5kb upstream 9382 true Scaffold81280: 59406-68787 Brassica rapa FPsc
Brara.K01645 0.5kb upstream 0.5kb upstream 500 false Scaffold81280: 68288-68787 Brassica rapa FPsc
Brara.K01645 0.5kb downstream 0.5kb downstream 9382 true Scaffold81280: 58906-68287 Brassica rapa FPsc
Brara.K01645 0.5kb downstream 0.5kb downstream 500 false Scaffold81280: 58906-59405 Brassica rapa FPsc
Brara.K01645 1.0kb upstream 1.0kb upstream 9882 true Scaffold81280: 59406-69287 Brassica rapa FPsc
Brara.K01645 1.0kb upstream 1.0kb upstream 1000 false Scaffold81280: 68288-69287 Brassica rapa FPsc
Brara.K01645 1.0kb downstream 1.0kb downstream 9882 true Scaffold81280: 58406-68287 Brassica rapa FPsc
Brara.K01645 1.0kb downstream 1.0kb downstream 1000 false Scaffold81280: 58406-59405 Brassica rapa FPsc
Brara.K01645 2.0kb upstream 2.0kb upstream 10882 true Scaffold81280: 59406-70287 Brassica rapa FPsc
Brara.K01645 2.0kb upstream 2.0kb upstream 2000 false Scaffold81280: 68288-70287 Brassica rapa FPsc
Brara.K01645 2.0kb downstream 2.0kb downstream 10882 true Scaffold81280: 57406-68287 Brassica rapa FPsc
Brara.K01645 2.0kb downstream 2.0kb downstream 2000 false Scaffold81280: 57406-59405 Brassica rapa FPsc
Brara.K01645 5.0kb upstream 5.0kb upstream 13882 true Scaffold81280: 59406-73287 Brassica rapa FPsc
Brara.K01645 5.0kb upstream 5.0kb upstream 5000 false Scaffold81280: 68288-73287 Brassica rapa FPsc
Brara.K01645 5.0kb downstream 5.0kb downstream 13882 true Scaffold81280: 54406-68287 Brassica rapa FPsc
Brara.K01645 5.0kb downstream 5.0kb downstream 5000 false Scaffold81280: 54406-59405 Brassica rapa FPsc
Brara.K01645 10.0kb upstream 10.0kb upstream 18882 true Scaffold81280: 59406-78287 Brassica rapa FPsc
Brara.K01645 10.0kb upstream 10.0kb upstream 10000 false Scaffold81280: 68288-78287 Brassica rapa FPsc
Brara.K01645 10.0kb downstream 10.0kb downstream 18882 true Scaffold81280: 49406-68287 Brassica rapa FPsc
Brara.K01645 10.0kb downstream 10.0kb downstream 10000 false Scaffold81280: 49406-59405 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378770 5261 Brassicaceae View MSA
123836971 5264 Brassicales-Malvales View MSA
124346943 5266 SBM View MSA
124254129 5268 Malvidae View MSA
124069272 5270 Rosid View MSA
123743783 5271 Pentapetalae View MSA
122794213 5272 Eudicot View MSA
122043215 5273 Angiosperm View MSA
121351769 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier