Gene : Brara.E03480 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR11909:SF131 - CASEIN KINASE-LIKE PROTEIN-RELATED Genomic Order:  3480
Name:  ? Brara.E03480 Secondary Identifier:  ? PAC:30624278
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03480 0.5kb upstream 0.5kb upstream 3975 true A05: 27552292-27556266 Brassica rapa FPsc
Brara.E03480 0.5kb upstream 0.5kb upstream 500 false A05: 27552292-27552791 Brassica rapa FPsc
Brara.E03480 0.5kb downstream 0.5kb downstream 3975 true A05: 27552792-27556766 Brassica rapa FPsc
Brara.E03480 0.5kb downstream 0.5kb downstream 500 false A05: 27556267-27556766 Brassica rapa FPsc
Brara.E03480 1.0kb upstream 1.0kb upstream 4475 true A05: 27551792-27556266 Brassica rapa FPsc
Brara.E03480 1.0kb upstream 1.0kb upstream 1000 false A05: 27551792-27552791 Brassica rapa FPsc
Brara.E03480 1.0kb downstream 1.0kb downstream 4475 true A05: 27552792-27557266 Brassica rapa FPsc
Brara.E03480 1.0kb downstream 1.0kb downstream 1000 false A05: 27556267-27557266 Brassica rapa FPsc
Brara.E03480 2.0kb upstream 2.0kb upstream 5475 true A05: 27550792-27556266 Brassica rapa FPsc
Brara.E03480 2.0kb upstream 2.0kb upstream 2000 false A05: 27550792-27552791 Brassica rapa FPsc
Brara.E03480 2.0kb downstream 2.0kb downstream 5475 true A05: 27552792-27558266 Brassica rapa FPsc
Brara.E03480 2.0kb downstream 2.0kb downstream 2000 false A05: 27556267-27558266 Brassica rapa FPsc
Brara.E03480 5.0kb upstream 5.0kb upstream 8475 true A05: 27547792-27556266 Brassica rapa FPsc
Brara.E03480 5.0kb upstream 5.0kb upstream 5000 false A05: 27547792-27552791 Brassica rapa FPsc
Brara.E03480 5.0kb downstream 5.0kb downstream 8475 true A05: 27552792-27561266 Brassica rapa FPsc
Brara.E03480 5.0kb downstream 5.0kb downstream 5000 false A05: 27556267-27561266 Brassica rapa FPsc
Brara.E03480 10.0kb upstream 10.0kb upstream 13475 true A05: 27542792-27556266 Brassica rapa FPsc
Brara.E03480 10.0kb upstream 10.0kb upstream 10000 false A05: 27542792-27552791 Brassica rapa FPsc
Brara.E03480 10.0kb downstream 10.0kb downstream 13475 true A05: 27552792-27566266 Brassica rapa FPsc
Brara.E03480 10.0kb downstream 10.0kb downstream 10000 false A05: 27556267-27566266 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041344 5273 Angiosperm View MSA
122349325 5261 Brassicaceae Singleton cluster - no MSA
123788529 5264 Brassicales-Malvales Singleton cluster - no MSA
124286555 5266 SBM Singleton cluster - no MSA
124140402 5268 Malvidae Singleton cluster - no MSA
123867618 5270 Rosid Singleton cluster - no MSA
123749294 5271 Pentapetalae View MSA
122796598 5272 Eudicot View MSA
121309833 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier