Gene : Brara.K01453 B. rapa FPsc v1.3
Defline:  (1 of 58) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  1
Name:  ? Brara.K01453 Secondary Identifier:  ? PAC:30627480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01453 0.5kb upstream 0.5kb upstream 2207 true Scaffold68014: 4124-6330 Brassica rapa FPsc
Brara.K01453 0.5kb upstream 0.5kb upstream 500 false Scaffold68014: 5831-6330 Brassica rapa FPsc
Brara.K01453 0.5kb downstream 0.5kb downstream 2207 true Scaffold68014: 3624-5830 Brassica rapa FPsc
Brara.K01453 0.5kb downstream 0.5kb downstream 500 false Scaffold68014: 3624-4123 Brassica rapa FPsc
Brara.K01453 1.0kb upstream 1.0kb upstream 2707 true Scaffold68014: 4124-6830 Brassica rapa FPsc
Brara.K01453 1.0kb upstream 1.0kb upstream 1000 false Scaffold68014: 5831-6830 Brassica rapa FPsc
Brara.K01453 1.0kb downstream 1.0kb downstream 2707 true Scaffold68014: 3124-5830 Brassica rapa FPsc
Brara.K01453 1.0kb downstream 1.0kb downstream 1000 false Scaffold68014: 3124-4123 Brassica rapa FPsc
Brara.K01453 2.0kb upstream 2.0kb upstream 3707 true Scaffold68014: 4124-7830 Brassica rapa FPsc
Brara.K01453 2.0kb upstream 2.0kb upstream 2000 false Scaffold68014: 5831-7830 Brassica rapa FPsc
Brara.K01453 2.0kb downstream 2.0kb downstream 3707 true Scaffold68014: 2124-5830 Brassica rapa FPsc
Brara.K01453 2.0kb downstream 2.0kb downstream 2000 false Scaffold68014: 2124-4123 Brassica rapa FPsc
Brara.K01453 5.0kb upstream 5.0kb upstream 6707 true Scaffold68014: 4124-10830 Brassica rapa FPsc
Brara.K01453 5.0kb upstream 5.0kb upstream 5000 false Scaffold68014: 5831-10830 Brassica rapa FPsc
Brara.K01453 5.0kb downstream 5.0kb downstream 5830 true Scaffold68014: 1-5830 Brassica rapa FPsc
Brara.K01453 5.0kb downstream 5.0kb downstream 4123 false Scaffold68014: 1-4123 Brassica rapa FPsc
Brara.K01453 10.0kb upstream 10.0kb upstream 10415 true Scaffold68014: 4124-14538 Brassica rapa FPsc
Brara.K01453 10.0kb upstream 10.0kb upstream 8708 false Scaffold68014: 5831-14538 Brassica rapa FPsc
Brara.K01453 10.0kb downstream 10.0kb downstream 5830 true Scaffold68014: 1-5830 Brassica rapa FPsc
Brara.K01453 10.0kb downstream 10.0kb downstream 4123 false Scaffold68014: 1-4123 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361583 5261 Brassicaceae View MSA
123831437 5264 Brassicales-Malvales View MSA
124338847 5266 SBM View MSA
124254378 5268 Malvidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier