Gene : Brara.C03001 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31155:SF4 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 1, CHLOROPLASTIC-RELATED Genomic Order:  3001
Name:  ? Brara.C03001 Secondary Identifier:  ? PAC:30616305
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5147 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5366 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03001 0.5kb upstream 0.5kb upstream 2583 true A03: 15296043-15298625 Brassica rapa FPsc
Brara.C03001 0.5kb upstream 0.5kb upstream 500 false A03: 15296043-15296542 Brassica rapa FPsc
Brara.C03001 0.5kb downstream 0.5kb downstream 2583 true A03: 15296543-15299125 Brassica rapa FPsc
Brara.C03001 0.5kb downstream 0.5kb downstream 500 false A03: 15298626-15299125 Brassica rapa FPsc
Brara.C03001 1.0kb upstream 1.0kb upstream 3083 true A03: 15295543-15298625 Brassica rapa FPsc
Brara.C03001 1.0kb upstream 1.0kb upstream 1000 false A03: 15295543-15296542 Brassica rapa FPsc
Brara.C03001 1.0kb downstream 1.0kb downstream 3083 true A03: 15296543-15299625 Brassica rapa FPsc
Brara.C03001 1.0kb downstream 1.0kb downstream 1000 false A03: 15298626-15299625 Brassica rapa FPsc
Brara.C03001 2.0kb upstream 2.0kb upstream 4083 true A03: 15294543-15298625 Brassica rapa FPsc
Brara.C03001 2.0kb upstream 2.0kb upstream 2000 false A03: 15294543-15296542 Brassica rapa FPsc
Brara.C03001 2.0kb downstream 2.0kb downstream 4083 true A03: 15296543-15300625 Brassica rapa FPsc
Brara.C03001 2.0kb downstream 2.0kb downstream 2000 false A03: 15298626-15300625 Brassica rapa FPsc
Brara.C03001 5.0kb upstream 5.0kb upstream 7083 true A03: 15291543-15298625 Brassica rapa FPsc
Brara.C03001 5.0kb upstream 5.0kb upstream 5000 false A03: 15291543-15296542 Brassica rapa FPsc
Brara.C03001 5.0kb downstream 5.0kb downstream 7083 true A03: 15296543-15303625 Brassica rapa FPsc
Brara.C03001 5.0kb downstream 5.0kb downstream 5000 false A03: 15298626-15303625 Brassica rapa FPsc
Brara.C03001 10.0kb upstream 10.0kb upstream 12083 true A03: 15286543-15298625 Brassica rapa FPsc
Brara.C03001 10.0kb upstream 10.0kb upstream 10000 false A03: 15286543-15296542 Brassica rapa FPsc
Brara.C03001 10.0kb downstream 10.0kb downstream 12083 true A03: 15296543-15308625 Brassica rapa FPsc
Brara.C03001 10.0kb downstream 10.0kb downstream 10000 false A03: 15298626-15308625 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362645 5261 Brassicaceae View MSA
123829168 5264 Brassicales-Malvales View MSA
124350159 5266 SBM View MSA
124243967 5268 Malvidae View MSA
124069229 5270 Rosid View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier