Gene : Brara.C03002 B. rapa FPsc v1.3
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3002
Name:  ? Brara.C03002 Secondary Identifier:  ? PAC:30618142
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03002 0.5kb upstream 0.5kb upstream 2195 true A03: 15298741-15300935 Brassica rapa FPsc
Brara.C03002 0.5kb upstream 0.5kb upstream 500 false A03: 15298741-15299240 Brassica rapa FPsc
Brara.C03002 0.5kb downstream 0.5kb downstream 2195 true A03: 15299241-15301435 Brassica rapa FPsc
Brara.C03002 0.5kb downstream 0.5kb downstream 500 false A03: 15300936-15301435 Brassica rapa FPsc
Brara.C03002 1.0kb upstream 1.0kb upstream 2695 true A03: 15298241-15300935 Brassica rapa FPsc
Brara.C03002 1.0kb upstream 1.0kb upstream 1000 false A03: 15298241-15299240 Brassica rapa FPsc
Brara.C03002 1.0kb downstream 1.0kb downstream 2695 true A03: 15299241-15301935 Brassica rapa FPsc
Brara.C03002 1.0kb downstream 1.0kb downstream 1000 false A03: 15300936-15301935 Brassica rapa FPsc
Brara.C03002 2.0kb upstream 2.0kb upstream 3695 true A03: 15297241-15300935 Brassica rapa FPsc
Brara.C03002 2.0kb upstream 2.0kb upstream 2000 false A03: 15297241-15299240 Brassica rapa FPsc
Brara.C03002 2.0kb downstream 2.0kb downstream 3695 true A03: 15299241-15302935 Brassica rapa FPsc
Brara.C03002 2.0kb downstream 2.0kb downstream 2000 false A03: 15300936-15302935 Brassica rapa FPsc
Brara.C03002 5.0kb upstream 5.0kb upstream 6695 true A03: 15294241-15300935 Brassica rapa FPsc
Brara.C03002 5.0kb upstream 5.0kb upstream 5000 false A03: 15294241-15299240 Brassica rapa FPsc
Brara.C03002 5.0kb downstream 5.0kb downstream 6695 true A03: 15299241-15305935 Brassica rapa FPsc
Brara.C03002 5.0kb downstream 5.0kb downstream 5000 false A03: 15300936-15305935 Brassica rapa FPsc
Brara.C03002 10.0kb upstream 10.0kb upstream 11695 true A03: 15289241-15300935 Brassica rapa FPsc
Brara.C03002 10.0kb upstream 10.0kb upstream 10000 false A03: 15289241-15299240 Brassica rapa FPsc
Brara.C03002 10.0kb downstream 10.0kb downstream 11695 true A03: 15299241-15310935 Brassica rapa FPsc
Brara.C03002 10.0kb downstream 10.0kb downstream 10000 false A03: 15300936-15310935 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347701 5261 Brassicaceae Singleton cluster - no MSA
123840230 5264 Brassicales-Malvales View MSA
124343591 5266 SBM View MSA
124242497 5268 Malvidae View MSA
124067728 5270 Rosid View MSA
123742188 5271 Pentapetalae View MSA
122792936 5272 Eudicot View MSA
122045505 5273 Angiosperm View MSA
121310455 5274 Embryophyte View MSA
123347933 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier