Gene : Brara.K01305 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED Genomic Order:  37
Name:  ? Brara.K01305 Secondary Identifier:  ? PAC:30623281
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01305 0.5kb upstream 0.5kb upstream 2350 true Scaffold58736: 360441-362790 Brassica rapa FPsc
Brara.K01305 0.5kb upstream 0.5kb upstream 500 false Scaffold58736: 360441-360940 Brassica rapa FPsc
Brara.K01305 0.5kb downstream 0.5kb downstream 2350 true Scaffold58736: 360941-363290 Brassica rapa FPsc
Brara.K01305 0.5kb downstream 0.5kb downstream 500 false Scaffold58736: 362791-363290 Brassica rapa FPsc
Brara.K01305 1.0kb upstream 1.0kb upstream 2850 true Scaffold58736: 359941-362790 Brassica rapa FPsc
Brara.K01305 1.0kb upstream 1.0kb upstream 1000 false Scaffold58736: 359941-360940 Brassica rapa FPsc
Brara.K01305 1.0kb downstream 1.0kb downstream 2850 true Scaffold58736: 360941-363790 Brassica rapa FPsc
Brara.K01305 1.0kb downstream 1.0kb downstream 1000 false Scaffold58736: 362791-363790 Brassica rapa FPsc
Brara.K01305 2.0kb upstream 2.0kb upstream 3850 true Scaffold58736: 358941-362790 Brassica rapa FPsc
Brara.K01305 2.0kb upstream 2.0kb upstream 2000 false Scaffold58736: 358941-360940 Brassica rapa FPsc
Brara.K01305 2.0kb downstream 2.0kb downstream 3850 true Scaffold58736: 360941-364790 Brassica rapa FPsc
Brara.K01305 2.0kb downstream 2.0kb downstream 2000 false Scaffold58736: 362791-364790 Brassica rapa FPsc
Brara.K01305 5.0kb upstream 5.0kb upstream 6850 true Scaffold58736: 355941-362790 Brassica rapa FPsc
Brara.K01305 5.0kb upstream 5.0kb upstream 5000 false Scaffold58736: 355941-360940 Brassica rapa FPsc
Brara.K01305 5.0kb downstream 5.0kb downstream 6850 true Scaffold58736: 360941-367790 Brassica rapa FPsc
Brara.K01305 5.0kb downstream 5.0kb downstream 5000 false Scaffold58736: 362791-367790 Brassica rapa FPsc
Brara.K01305 10.0kb upstream 10.0kb upstream 11850 true Scaffold58736: 350941-362790 Brassica rapa FPsc
Brara.K01305 10.0kb upstream 10.0kb upstream 10000 false Scaffold58736: 350941-360940 Brassica rapa FPsc
Brara.K01305 10.0kb downstream 10.0kb downstream 11850 true Scaffold58736: 360941-372790 Brassica rapa FPsc
Brara.K01305 10.0kb downstream 10.0kb downstream 10000 false Scaffold58736: 362791-372790 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361652 5261 Brassicaceae View MSA
123833591 5264 Brassicales-Malvales View MSA
124341458 5266 SBM View MSA
124241897 5268 Malvidae View MSA
124063096 5270 Rosid View MSA
123741004 5271 Pentapetalae View MSA
122785820 5272 Eudicot View MSA
122046591 5273 Angiosperm View MSA
121310628 5274 Embryophyte View MSA
123348063 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier