Gene : Brara.K01313 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR31388:SF16 - PEROXIDASE 14-RELATED Genomic Order:  45
Name:  ? Brara.K01313 Secondary Identifier:  ? PAC:30623305
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7214 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7445 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01313 0.5kb upstream 0.5kb upstream 1750 true Scaffold58736: 399132-400881 Brassica rapa FPsc
Brara.K01313 0.5kb upstream 0.5kb upstream 500 false Scaffold58736: 399132-399631 Brassica rapa FPsc
Brara.K01313 0.5kb downstream 0.5kb downstream 1750 true Scaffold58736: 399632-401381 Brassica rapa FPsc
Brara.K01313 0.5kb downstream 0.5kb downstream 500 false Scaffold58736: 400882-401381 Brassica rapa FPsc
Brara.K01313 1.0kb upstream 1.0kb upstream 2250 true Scaffold58736: 398632-400881 Brassica rapa FPsc
Brara.K01313 1.0kb upstream 1.0kb upstream 1000 false Scaffold58736: 398632-399631 Brassica rapa FPsc
Brara.K01313 1.0kb downstream 1.0kb downstream 2250 true Scaffold58736: 399632-401881 Brassica rapa FPsc
Brara.K01313 1.0kb downstream 1.0kb downstream 1000 false Scaffold58736: 400882-401881 Brassica rapa FPsc
Brara.K01313 2.0kb upstream 2.0kb upstream 3250 true Scaffold58736: 397632-400881 Brassica rapa FPsc
Brara.K01313 2.0kb upstream 2.0kb upstream 2000 false Scaffold58736: 397632-399631 Brassica rapa FPsc
Brara.K01313 2.0kb downstream 2.0kb downstream 3250 true Scaffold58736: 399632-402881 Brassica rapa FPsc
Brara.K01313 2.0kb downstream 2.0kb downstream 2000 false Scaffold58736: 400882-402881 Brassica rapa FPsc
Brara.K01313 5.0kb upstream 5.0kb upstream 6250 true Scaffold58736: 394632-400881 Brassica rapa FPsc
Brara.K01313 5.0kb upstream 5.0kb upstream 5000 false Scaffold58736: 394632-399631 Brassica rapa FPsc
Brara.K01313 5.0kb downstream 5.0kb downstream 6250 true Scaffold58736: 399632-405881 Brassica rapa FPsc
Brara.K01313 5.0kb downstream 5.0kb downstream 5000 false Scaffold58736: 400882-405881 Brassica rapa FPsc
Brara.K01313 10.0kb upstream 10.0kb upstream 11250 true Scaffold58736: 389632-400881 Brassica rapa FPsc
Brara.K01313 10.0kb upstream 10.0kb upstream 10000 false Scaffold58736: 389632-399631 Brassica rapa FPsc
Brara.K01313 10.0kb downstream 10.0kb downstream 11250 true Scaffold58736: 399632-410881 Brassica rapa FPsc
Brara.K01313 10.0kb downstream 10.0kb downstream 10000 false Scaffold58736: 400882-410881 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365719 5261 Brassicaceae View MSA
123799020 5264 Brassicales-Malvales View MSA
124296586 5266 SBM View MSA
124148693 5268 Malvidae View MSA
124074247 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier