Gene : Brara.K01319 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR22953:SF47 - PURPLE ACID PHOSPHATASE 11-RELATED Genomic Order:  51
Name:  ? Brara.K01319 Secondary Identifier:  ? PAC:30623306
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5083 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6348 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01319 0.5kb upstream 0.5kb upstream 2378 true Scaffold58736: 450171-452548 Brassica rapa FPsc
Brara.K01319 0.5kb upstream 0.5kb upstream 500 false Scaffold58736: 450171-450670 Brassica rapa FPsc
Brara.K01319 0.5kb downstream 0.5kb downstream 2378 true Scaffold58736: 450671-453048 Brassica rapa FPsc
Brara.K01319 0.5kb downstream 0.5kb downstream 500 false Scaffold58736: 452549-453048 Brassica rapa FPsc
Brara.K01319 1.0kb upstream 1.0kb upstream 2878 true Scaffold58736: 449671-452548 Brassica rapa FPsc
Brara.K01319 1.0kb upstream 1.0kb upstream 1000 false Scaffold58736: 449671-450670 Brassica rapa FPsc
Brara.K01319 1.0kb downstream 1.0kb downstream 2878 true Scaffold58736: 450671-453548 Brassica rapa FPsc
Brara.K01319 1.0kb downstream 1.0kb downstream 1000 false Scaffold58736: 452549-453548 Brassica rapa FPsc
Brara.K01319 2.0kb upstream 2.0kb upstream 3878 true Scaffold58736: 448671-452548 Brassica rapa FPsc
Brara.K01319 2.0kb upstream 2.0kb upstream 2000 false Scaffold58736: 448671-450670 Brassica rapa FPsc
Brara.K01319 2.0kb downstream 2.0kb downstream 3878 true Scaffold58736: 450671-454548 Brassica rapa FPsc
Brara.K01319 2.0kb downstream 2.0kb downstream 2000 false Scaffold58736: 452549-454548 Brassica rapa FPsc
Brara.K01319 5.0kb upstream 5.0kb upstream 6878 true Scaffold58736: 445671-452548 Brassica rapa FPsc
Brara.K01319 5.0kb upstream 5.0kb upstream 5000 false Scaffold58736: 445671-450670 Brassica rapa FPsc
Brara.K01319 5.0kb downstream 5.0kb downstream 6878 true Scaffold58736: 450671-457548 Brassica rapa FPsc
Brara.K01319 5.0kb downstream 5.0kb downstream 5000 false Scaffold58736: 452549-457548 Brassica rapa FPsc
Brara.K01319 10.0kb upstream 10.0kb upstream 11878 true Scaffold58736: 440671-452548 Brassica rapa FPsc
Brara.K01319 10.0kb upstream 10.0kb upstream 10000 false Scaffold58736: 440671-450670 Brassica rapa FPsc
Brara.K01319 10.0kb downstream 10.0kb downstream 11878 true Scaffold58736: 450671-462548 Brassica rapa FPsc
Brara.K01319 10.0kb downstream 10.0kb downstream 10000 false Scaffold58736: 452549-462548 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380337 5261 Brassicaceae View MSA
123802660 5264 Brassicales-Malvales View MSA
124349813 5266 SBM View MSA
124244573 5268 Malvidae View MSA
123951986 5270 Rosid View MSA
123737494 5271 Pentapetalae View MSA
122792847 5272 Eudicot View MSA
122050360 5273 Angiosperm View MSA
121351600 5274 Embryophyte View MSA
123426131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier