Gene : Brara.K01320 B. rapa FPsc v1.3
Defline:  (1 of 11) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  52
Name:  ? Brara.K01320 Secondary Identifier:  ? PAC:30623333
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01320 0.5kb upstream 0.5kb upstream 1844 true Scaffold58736: 460650-462493 Brassica rapa FPsc
Brara.K01320 0.5kb upstream 0.5kb upstream 500 false Scaffold58736: 460650-461149 Brassica rapa FPsc
Brara.K01320 0.5kb downstream 0.5kb downstream 1844 true Scaffold58736: 461150-462993 Brassica rapa FPsc
Brara.K01320 0.5kb downstream 0.5kb downstream 500 false Scaffold58736: 462494-462993 Brassica rapa FPsc
Brara.K01320 1.0kb upstream 1.0kb upstream 2344 true Scaffold58736: 460150-462493 Brassica rapa FPsc
Brara.K01320 1.0kb upstream 1.0kb upstream 1000 false Scaffold58736: 460150-461149 Brassica rapa FPsc
Brara.K01320 1.0kb downstream 1.0kb downstream 2344 true Scaffold58736: 461150-463493 Brassica rapa FPsc
Brara.K01320 1.0kb downstream 1.0kb downstream 1000 false Scaffold58736: 462494-463493 Brassica rapa FPsc
Brara.K01320 2.0kb upstream 2.0kb upstream 3344 true Scaffold58736: 459150-462493 Brassica rapa FPsc
Brara.K01320 2.0kb upstream 2.0kb upstream 2000 false Scaffold58736: 459150-461149 Brassica rapa FPsc
Brara.K01320 2.0kb downstream 2.0kb downstream 3344 true Scaffold58736: 461150-464493 Brassica rapa FPsc
Brara.K01320 2.0kb downstream 2.0kb downstream 2000 false Scaffold58736: 462494-464493 Brassica rapa FPsc
Brara.K01320 5.0kb upstream 5.0kb upstream 6344 true Scaffold58736: 456150-462493 Brassica rapa FPsc
Brara.K01320 5.0kb upstream 5.0kb upstream 5000 false Scaffold58736: 456150-461149 Brassica rapa FPsc
Brara.K01320 5.0kb downstream 5.0kb downstream 6344 true Scaffold58736: 461150-467493 Brassica rapa FPsc
Brara.K01320 5.0kb downstream 5.0kb downstream 5000 false Scaffold58736: 462494-467493 Brassica rapa FPsc
Brara.K01320 10.0kb upstream 10.0kb upstream 11344 true Scaffold58736: 451150-462493 Brassica rapa FPsc
Brara.K01320 10.0kb upstream 10.0kb upstream 10000 false Scaffold58736: 451150-461149 Brassica rapa FPsc
Brara.K01320 10.0kb downstream 10.0kb downstream 11344 true Scaffold58736: 461150-472493 Brassica rapa FPsc
Brara.K01320 10.0kb downstream 10.0kb downstream 10000 false Scaffold58736: 462494-472493 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375383 5261 Brassicaceae View MSA
123800944 5264 Brassicales-Malvales View MSA
124298299 5266 SBM View MSA
124149972 5268 Malvidae View MSA
124051795 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier