Gene : Brara.K01405 B. rapa FPsc v1.3
Defline:  (1 of 9) PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  14
Name:  ? Brara.K01405 Secondary Identifier:  ? PAC:30614838
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01405 0.5kb upstream 0.5kb upstream 2150 true Scaffold63036: 57267-59416 Brassica rapa FPsc
Brara.K01405 0.5kb upstream 0.5kb upstream 500 false Scaffold63036: 57267-57766 Brassica rapa FPsc
Brara.K01405 0.5kb downstream 0.5kb downstream 2150 true Scaffold63036: 57767-59916 Brassica rapa FPsc
Brara.K01405 0.5kb downstream 0.5kb downstream 500 false Scaffold63036: 59417-59916 Brassica rapa FPsc
Brara.K01405 1.0kb upstream 1.0kb upstream 2650 true Scaffold63036: 56767-59416 Brassica rapa FPsc
Brara.K01405 1.0kb upstream 1.0kb upstream 1000 false Scaffold63036: 56767-57766 Brassica rapa FPsc
Brara.K01405 1.0kb downstream 1.0kb downstream 2650 true Scaffold63036: 57767-60416 Brassica rapa FPsc
Brara.K01405 1.0kb downstream 1.0kb downstream 1000 false Scaffold63036: 59417-60416 Brassica rapa FPsc
Brara.K01405 2.0kb upstream 2.0kb upstream 3650 true Scaffold63036: 55767-59416 Brassica rapa FPsc
Brara.K01405 2.0kb upstream 2.0kb upstream 2000 false Scaffold63036: 55767-57766 Brassica rapa FPsc
Brara.K01405 2.0kb downstream 2.0kb downstream 3650 true Scaffold63036: 57767-61416 Brassica rapa FPsc
Brara.K01405 2.0kb downstream 2.0kb downstream 2000 false Scaffold63036: 59417-61416 Brassica rapa FPsc
Brara.K01405 5.0kb upstream 5.0kb upstream 6650 true Scaffold63036: 52767-59416 Brassica rapa FPsc
Brara.K01405 5.0kb upstream 5.0kb upstream 5000 false Scaffold63036: 52767-57766 Brassica rapa FPsc
Brara.K01405 5.0kb downstream 5.0kb downstream 6650 true Scaffold63036: 57767-64416 Brassica rapa FPsc
Brara.K01405 5.0kb downstream 5.0kb downstream 5000 false Scaffold63036: 59417-64416 Brassica rapa FPsc
Brara.K01405 10.0kb upstream 10.0kb upstream 11650 true Scaffold63036: 47767-59416 Brassica rapa FPsc
Brara.K01405 10.0kb upstream 10.0kb upstream 10000 false Scaffold63036: 47767-57766 Brassica rapa FPsc
Brara.K01405 10.0kb downstream 10.0kb downstream 11650 true Scaffold63036: 57767-69416 Brassica rapa FPsc
Brara.K01405 10.0kb downstream 10.0kb downstream 10000 false Scaffold63036: 59417-69416 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371949 5261 Brassicaceae View MSA
123836603 5264 Brassicales-Malvales View MSA
124340657 5266 SBM View MSA
124251241 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier