Gene : Brara.K01409 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  18
Name:  ? Brara.K01409 Secondary Identifier:  ? PAC:30614833
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01409 0.5kb upstream 0.5kb upstream 2168 true Scaffold63036: 73273-75440 Brassica rapa FPsc
Brara.K01409 0.5kb upstream 0.5kb upstream 500 false Scaffold63036: 73273-73772 Brassica rapa FPsc
Brara.K01409 0.5kb downstream 0.5kb downstream 2168 true Scaffold63036: 73773-75940 Brassica rapa FPsc
Brara.K01409 0.5kb downstream 0.5kb downstream 500 false Scaffold63036: 75441-75940 Brassica rapa FPsc
Brara.K01409 1.0kb upstream 1.0kb upstream 2668 true Scaffold63036: 72773-75440 Brassica rapa FPsc
Brara.K01409 1.0kb upstream 1.0kb upstream 1000 false Scaffold63036: 72773-73772 Brassica rapa FPsc
Brara.K01409 1.0kb downstream 1.0kb downstream 2668 true Scaffold63036: 73773-76440 Brassica rapa FPsc
Brara.K01409 1.0kb downstream 1.0kb downstream 1000 false Scaffold63036: 75441-76440 Brassica rapa FPsc
Brara.K01409 2.0kb upstream 2.0kb upstream 3668 true Scaffold63036: 71773-75440 Brassica rapa FPsc
Brara.K01409 2.0kb upstream 2.0kb upstream 2000 false Scaffold63036: 71773-73772 Brassica rapa FPsc
Brara.K01409 2.0kb downstream 2.0kb downstream 3668 true Scaffold63036: 73773-77440 Brassica rapa FPsc
Brara.K01409 2.0kb downstream 2.0kb downstream 2000 false Scaffold63036: 75441-77440 Brassica rapa FPsc
Brara.K01409 5.0kb upstream 5.0kb upstream 6668 true Scaffold63036: 68773-75440 Brassica rapa FPsc
Brara.K01409 5.0kb upstream 5.0kb upstream 5000 false Scaffold63036: 68773-73772 Brassica rapa FPsc
Brara.K01409 5.0kb downstream 5.0kb downstream 6668 true Scaffold63036: 73773-80440 Brassica rapa FPsc
Brara.K01409 5.0kb downstream 5.0kb downstream 5000 false Scaffold63036: 75441-80440 Brassica rapa FPsc
Brara.K01409 10.0kb upstream 10.0kb upstream 11668 true Scaffold63036: 63773-75440 Brassica rapa FPsc
Brara.K01409 10.0kb upstream 10.0kb upstream 10000 false Scaffold63036: 63773-73772 Brassica rapa FPsc
Brara.K01409 10.0kb downstream 10.0kb downstream 8878 true Scaffold63036: 73773-82650 Brassica rapa FPsc
Brara.K01409 10.0kb downstream 10.0kb downstream 7210 false Scaffold63036: 75441-82650 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371950 5261 Brassicaceae View MSA
123833611 5264 Brassicales-Malvales View MSA
124346269 5266 SBM View MSA
124252123 5268 Malvidae View MSA
124064515 5270 Rosid View MSA
123741380 5271 Pentapetalae View MSA
122789129 5272 Eudicot View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier