Gene : Brara.C03789 B. rapa FPsc v1.3
Defline:  (1 of 3) 3.5.99.10 - 2-iminobutanoate/2-iminopropanoate deaminase / Enamine/imine deaminase Genomic Order:  3789
Name:  ? Brara.C03789 Secondary Identifier:  ? PAC:30617294
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LCYSDEG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY0-1535 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6196 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03789 0.5kb upstream 0.5kb upstream 1960 true A03: 19559919-19561878 Brassica rapa FPsc
Brara.C03789 0.5kb upstream 0.5kb upstream 500 false A03: 19561379-19561878 Brassica rapa FPsc
Brara.C03789 0.5kb downstream 0.5kb downstream 1960 true A03: 19559419-19561378 Brassica rapa FPsc
Brara.C03789 0.5kb downstream 0.5kb downstream 500 false A03: 19559419-19559918 Brassica rapa FPsc
Brara.C03789 1.0kb upstream 1.0kb upstream 2460 true A03: 19559919-19562378 Brassica rapa FPsc
Brara.C03789 1.0kb upstream 1.0kb upstream 1000 false A03: 19561379-19562378 Brassica rapa FPsc
Brara.C03789 1.0kb downstream 1.0kb downstream 2460 true A03: 19558919-19561378 Brassica rapa FPsc
Brara.C03789 1.0kb downstream 1.0kb downstream 1000 false A03: 19558919-19559918 Brassica rapa FPsc
Brara.C03789 2.0kb upstream 2.0kb upstream 3460 true A03: 19559919-19563378 Brassica rapa FPsc
Brara.C03789 2.0kb upstream 2.0kb upstream 2000 false A03: 19561379-19563378 Brassica rapa FPsc
Brara.C03789 2.0kb downstream 2.0kb downstream 3460 true A03: 19557919-19561378 Brassica rapa FPsc
Brara.C03789 2.0kb downstream 2.0kb downstream 2000 false A03: 19557919-19559918 Brassica rapa FPsc
Brara.C03789 5.0kb upstream 5.0kb upstream 6460 true A03: 19559919-19566378 Brassica rapa FPsc
Brara.C03789 5.0kb upstream 5.0kb upstream 5000 false A03: 19561379-19566378 Brassica rapa FPsc
Brara.C03789 5.0kb downstream 5.0kb downstream 6460 true A03: 19554919-19561378 Brassica rapa FPsc
Brara.C03789 5.0kb downstream 5.0kb downstream 5000 false A03: 19554919-19559918 Brassica rapa FPsc
Brara.C03789 10.0kb upstream 10.0kb upstream 11460 true A03: 19559919-19571378 Brassica rapa FPsc
Brara.C03789 10.0kb upstream 10.0kb upstream 10000 false A03: 19561379-19571378 Brassica rapa FPsc
Brara.C03789 10.0kb downstream 10.0kb downstream 11460 true A03: 19549919-19561378 Brassica rapa FPsc
Brara.C03789 10.0kb downstream 10.0kb downstream 10000 false A03: 19549919-19559918 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121504350 5273 Angiosperm Singleton cluster - no MSA
122347458 5261 Brassicaceae Singleton cluster - no MSA
123786980 5264 Brassicales-Malvales Singleton cluster - no MSA
124285070 5266 SBM Singleton cluster - no MSA
124139159 5268 Malvidae Singleton cluster - no MSA
123866595 5270 Rosid Singleton cluster - no MSA
123451600 5271 Pentapetalae Singleton cluster - no MSA
122487103 5272 Eudicot Singleton cluster - no MSA
121349412 5274 Embryophyte View MSA
123426885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier