Gene : Brara.C03788 B. rapa FPsc v1.3
Defline:  (1 of 88) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  3788
Name:  ? Brara.C03788 Secondary Identifier:  ? PAC:30618868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03788 0.5kb upstream 0.5kb upstream 3160 true A03: 19557078-19560237 Brassica rapa FPsc
Brara.C03788 0.5kb upstream 0.5kb upstream 500 false A03: 19557078-19557577 Brassica rapa FPsc
Brara.C03788 0.5kb downstream 0.5kb downstream 3160 true A03: 19557578-19560737 Brassica rapa FPsc
Brara.C03788 0.5kb downstream 0.5kb downstream 500 false A03: 19560238-19560737 Brassica rapa FPsc
Brara.C03788 1.0kb upstream 1.0kb upstream 3660 true A03: 19556578-19560237 Brassica rapa FPsc
Brara.C03788 1.0kb upstream 1.0kb upstream 1000 false A03: 19556578-19557577 Brassica rapa FPsc
Brara.C03788 1.0kb downstream 1.0kb downstream 3660 true A03: 19557578-19561237 Brassica rapa FPsc
Brara.C03788 1.0kb downstream 1.0kb downstream 1000 false A03: 19560238-19561237 Brassica rapa FPsc
Brara.C03788 2.0kb upstream 2.0kb upstream 4660 true A03: 19555578-19560237 Brassica rapa FPsc
Brara.C03788 2.0kb upstream 2.0kb upstream 2000 false A03: 19555578-19557577 Brassica rapa FPsc
Brara.C03788 2.0kb downstream 2.0kb downstream 4660 true A03: 19557578-19562237 Brassica rapa FPsc
Brara.C03788 2.0kb downstream 2.0kb downstream 2000 false A03: 19560238-19562237 Brassica rapa FPsc
Brara.C03788 5.0kb upstream 5.0kb upstream 7660 true A03: 19552578-19560237 Brassica rapa FPsc
Brara.C03788 5.0kb upstream 5.0kb upstream 5000 false A03: 19552578-19557577 Brassica rapa FPsc
Brara.C03788 5.0kb downstream 5.0kb downstream 7660 true A03: 19557578-19565237 Brassica rapa FPsc
Brara.C03788 5.0kb downstream 5.0kb downstream 5000 false A03: 19560238-19565237 Brassica rapa FPsc
Brara.C03788 10.0kb upstream 10.0kb upstream 12660 true A03: 19547578-19560237 Brassica rapa FPsc
Brara.C03788 10.0kb upstream 10.0kb upstream 10000 false A03: 19547578-19557577 Brassica rapa FPsc
Brara.C03788 10.0kb downstream 10.0kb downstream 12660 true A03: 19557578-19570237 Brassica rapa FPsc
Brara.C03788 10.0kb downstream 10.0kb downstream 10000 false A03: 19560238-19570237 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029521 5273 Angiosperm View MSA
122381924 5261 Brassicaceae View MSA
123803541 5264 Brassicales-Malvales View MSA
124300641 5266 SBM View MSA
124252315 5268 Malvidae View MSA
124073089 5270 Rosid View MSA
123752970 5271 Pentapetalae View MSA
122797935 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
121349273 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier