Gene : Brara.C03820 B. rapa FPsc v1.3
Defline:  (1 of 6) PF00122//PF00689//PF00690//PF00702//PF12515 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // haloacid dehalogenase-like hydrolase (Hydrolase) // Ca2+-ATPase N terminal autoinhibitory domain (CaATP_NAI) Genomic Order:  3820
Name:  ? Brara.C03820 Secondary Identifier:  ? PAC:30619505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03820 0.5kb upstream 0.5kb upstream 7108 true A03: 19739586-19746693 Brassica rapa FPsc
Brara.C03820 0.5kb upstream 0.5kb upstream 500 false A03: 19739586-19740085 Brassica rapa FPsc
Brara.C03820 0.5kb downstream 0.5kb downstream 7108 true A03: 19740086-19747193 Brassica rapa FPsc
Brara.C03820 0.5kb downstream 0.5kb downstream 500 false A03: 19746694-19747193 Brassica rapa FPsc
Brara.C03820 1.0kb upstream 1.0kb upstream 7608 true A03: 19739086-19746693 Brassica rapa FPsc
Brara.C03820 1.0kb upstream 1.0kb upstream 1000 false A03: 19739086-19740085 Brassica rapa FPsc
Brara.C03820 1.0kb downstream 1.0kb downstream 7608 true A03: 19740086-19747693 Brassica rapa FPsc
Brara.C03820 1.0kb downstream 1.0kb downstream 1000 false A03: 19746694-19747693 Brassica rapa FPsc
Brara.C03820 2.0kb upstream 2.0kb upstream 8608 true A03: 19738086-19746693 Brassica rapa FPsc
Brara.C03820 2.0kb upstream 2.0kb upstream 2000 false A03: 19738086-19740085 Brassica rapa FPsc
Brara.C03820 2.0kb downstream 2.0kb downstream 8608 true A03: 19740086-19748693 Brassica rapa FPsc
Brara.C03820 2.0kb downstream 2.0kb downstream 2000 false A03: 19746694-19748693 Brassica rapa FPsc
Brara.C03820 5.0kb upstream 5.0kb upstream 11608 true A03: 19735086-19746693 Brassica rapa FPsc
Brara.C03820 5.0kb upstream 5.0kb upstream 5000 false A03: 19735086-19740085 Brassica rapa FPsc
Brara.C03820 5.0kb downstream 5.0kb downstream 11608 true A03: 19740086-19751693 Brassica rapa FPsc
Brara.C03820 5.0kb downstream 5.0kb downstream 5000 false A03: 19746694-19751693 Brassica rapa FPsc
Brara.C03820 10.0kb upstream 10.0kb upstream 16608 true A03: 19730086-19746693 Brassica rapa FPsc
Brara.C03820 10.0kb upstream 10.0kb upstream 10000 false A03: 19730086-19740085 Brassica rapa FPsc
Brara.C03820 10.0kb downstream 10.0kb downstream 16608 true A03: 19740086-19756693 Brassica rapa FPsc
Brara.C03820 10.0kb downstream 10.0kb downstream 10000 false A03: 19746694-19756693 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032330 5273 Angiosperm View MSA
122348077 5261 Brassicaceae Singleton cluster - no MSA
123787486 5264 Brassicales-Malvales Singleton cluster - no MSA
124285558 5266 SBM Singleton cluster - no MSA
124256178 5268 Malvidae View MSA
124075537 5270 Rosid View MSA
123628899 5271 Pentapetalae View MSA
122663137 5272 Eudicot View MSA
121301239 5274 Embryophyte View MSA
123338909 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier