Gene : Brara.C03631 B. rapa FPsc v1.3
Defline:  (1 of 9) PTHR34458:SF5 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  3631
Name:  ? Brara.C03631 Secondary Identifier:  ? PAC:30615294
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03631 0.5kb upstream 0.5kb upstream 2040 true A03: 18659743-18661782 Brassica rapa FPsc
Brara.C03631 0.5kb upstream 0.5kb upstream 500 false A03: 18661283-18661782 Brassica rapa FPsc
Brara.C03631 0.5kb downstream 0.5kb downstream 2040 true A03: 18659243-18661282 Brassica rapa FPsc
Brara.C03631 0.5kb downstream 0.5kb downstream 500 false A03: 18659243-18659742 Brassica rapa FPsc
Brara.C03631 1.0kb upstream 1.0kb upstream 2540 true A03: 18659743-18662282 Brassica rapa FPsc
Brara.C03631 1.0kb upstream 1.0kb upstream 1000 false A03: 18661283-18662282 Brassica rapa FPsc
Brara.C03631 1.0kb downstream 1.0kb downstream 2540 true A03: 18658743-18661282 Brassica rapa FPsc
Brara.C03631 1.0kb downstream 1.0kb downstream 1000 false A03: 18658743-18659742 Brassica rapa FPsc
Brara.C03631 2.0kb upstream 2.0kb upstream 3540 true A03: 18659743-18663282 Brassica rapa FPsc
Brara.C03631 2.0kb upstream 2.0kb upstream 2000 false A03: 18661283-18663282 Brassica rapa FPsc
Brara.C03631 2.0kb downstream 2.0kb downstream 3540 true A03: 18657743-18661282 Brassica rapa FPsc
Brara.C03631 2.0kb downstream 2.0kb downstream 2000 false A03: 18657743-18659742 Brassica rapa FPsc
Brara.C03631 5.0kb upstream 5.0kb upstream 6540 true A03: 18659743-18666282 Brassica rapa FPsc
Brara.C03631 5.0kb upstream 5.0kb upstream 5000 false A03: 18661283-18666282 Brassica rapa FPsc
Brara.C03631 5.0kb downstream 5.0kb downstream 6540 true A03: 18654743-18661282 Brassica rapa FPsc
Brara.C03631 5.0kb downstream 5.0kb downstream 5000 false A03: 18654743-18659742 Brassica rapa FPsc
Brara.C03631 10.0kb upstream 10.0kb upstream 11540 true A03: 18659743-18671282 Brassica rapa FPsc
Brara.C03631 10.0kb upstream 10.0kb upstream 10000 false A03: 18661283-18671282 Brassica rapa FPsc
Brara.C03631 10.0kb downstream 10.0kb downstream 11540 true A03: 18649743-18661282 Brassica rapa FPsc
Brara.C03631 10.0kb downstream 10.0kb downstream 10000 false A03: 18649743-18659742 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346898 5261 Brassicaceae Singleton cluster - no MSA
123786515 5264 Brassicales-Malvales Singleton cluster - no MSA
124284619 5266 SBM Singleton cluster - no MSA
124138798 5268 Malvidae Singleton cluster - no MSA
123866293 5270 Rosid Singleton cluster - no MSA
123754956 5271 Pentapetalae View MSA
122776276 5272 Eudicot View MSA
122041947 5273 Angiosperm View MSA
121309906 5274 Embryophyte View MSA
123347539 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier