Gene : Brara.F00113 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR28039:SF6 - ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 18, MITOCHONDRIAL-RELATED Genomic Order:  113
Name:  ? Brara.F00113 Secondary Identifier:  ? PAC:30629265
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY1F-FLAVSYN Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5059 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6787 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00113 0.5kb upstream 0.5kb upstream 2158 true A06: 728505-730662 Brassica rapa FPsc
Brara.F00113 0.5kb upstream 0.5kb upstream 500 false A06: 728505-729004 Brassica rapa FPsc
Brara.F00113 0.5kb downstream 0.5kb downstream 2158 true A06: 729005-731162 Brassica rapa FPsc
Brara.F00113 0.5kb downstream 0.5kb downstream 500 false A06: 730663-731162 Brassica rapa FPsc
Brara.F00113 1.0kb upstream 1.0kb upstream 2658 true A06: 728005-730662 Brassica rapa FPsc
Brara.F00113 1.0kb upstream 1.0kb upstream 1000 false A06: 728005-729004 Brassica rapa FPsc
Brara.F00113 1.0kb downstream 1.0kb downstream 2658 true A06: 729005-731662 Brassica rapa FPsc
Brara.F00113 1.0kb downstream 1.0kb downstream 1000 false A06: 730663-731662 Brassica rapa FPsc
Brara.F00113 2.0kb upstream 2.0kb upstream 3658 true A06: 727005-730662 Brassica rapa FPsc
Brara.F00113 2.0kb upstream 2.0kb upstream 2000 false A06: 727005-729004 Brassica rapa FPsc
Brara.F00113 2.0kb downstream 2.0kb downstream 3658 true A06: 729005-732662 Brassica rapa FPsc
Brara.F00113 2.0kb downstream 2.0kb downstream 2000 false A06: 730663-732662 Brassica rapa FPsc
Brara.F00113 5.0kb upstream 5.0kb upstream 6658 true A06: 724005-730662 Brassica rapa FPsc
Brara.F00113 5.0kb upstream 5.0kb upstream 5000 false A06: 724005-729004 Brassica rapa FPsc
Brara.F00113 5.0kb downstream 5.0kb downstream 6658 true A06: 729005-735662 Brassica rapa FPsc
Brara.F00113 5.0kb downstream 5.0kb downstream 5000 false A06: 730663-735662 Brassica rapa FPsc
Brara.F00113 10.0kb upstream 10.0kb upstream 11658 true A06: 719005-730662 Brassica rapa FPsc
Brara.F00113 10.0kb upstream 10.0kb upstream 10000 false A06: 719005-729004 Brassica rapa FPsc
Brara.F00113 10.0kb downstream 10.0kb downstream 11658 true A06: 729005-740662 Brassica rapa FPsc
Brara.F00113 10.0kb downstream 10.0kb downstream 10000 false A06: 730663-740662 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368031 5261 Brassicaceae View MSA
123829937 5264 Brassicales-Malvales View MSA
124338750 5266 SBM View MSA
124250192 5268 Malvidae View MSA
124063090 5270 Rosid View MSA
123738535 5271 Pentapetalae View MSA
122786732 5272 Eudicot View MSA
122050313 5273 Angiosperm View MSA
121351129 5274 Embryophyte View MSA
123427502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier