Gene : Brara.C03713 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12970 - TUMOR NECROSIS FACTOR SUPERFAMILY, MEMBER 5-INDUCED PROTEIN 1 CLAST3 Genomic Order:  3713
Name:  ? Brara.C03713 Secondary Identifier:  ? PAC:30615334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03713 0.5kb upstream 0.5kb upstream 2297 true A03: 19121300-19123596 Brassica rapa FPsc
Brara.C03713 0.5kb upstream 0.5kb upstream 500 false A03: 19123097-19123596 Brassica rapa FPsc
Brara.C03713 0.5kb downstream 0.5kb downstream 2297 true A03: 19120800-19123096 Brassica rapa FPsc
Brara.C03713 0.5kb downstream 0.5kb downstream 500 false A03: 19120800-19121299 Brassica rapa FPsc
Brara.C03713 1.0kb upstream 1.0kb upstream 2797 true A03: 19121300-19124096 Brassica rapa FPsc
Brara.C03713 1.0kb upstream 1.0kb upstream 1000 false A03: 19123097-19124096 Brassica rapa FPsc
Brara.C03713 1.0kb downstream 1.0kb downstream 2797 true A03: 19120300-19123096 Brassica rapa FPsc
Brara.C03713 1.0kb downstream 1.0kb downstream 1000 false A03: 19120300-19121299 Brassica rapa FPsc
Brara.C03713 2.0kb upstream 2.0kb upstream 3797 true A03: 19121300-19125096 Brassica rapa FPsc
Brara.C03713 2.0kb upstream 2.0kb upstream 2000 false A03: 19123097-19125096 Brassica rapa FPsc
Brara.C03713 2.0kb downstream 2.0kb downstream 3797 true A03: 19119300-19123096 Brassica rapa FPsc
Brara.C03713 2.0kb downstream 2.0kb downstream 2000 false A03: 19119300-19121299 Brassica rapa FPsc
Brara.C03713 5.0kb upstream 5.0kb upstream 6797 true A03: 19121300-19128096 Brassica rapa FPsc
Brara.C03713 5.0kb upstream 5.0kb upstream 5000 false A03: 19123097-19128096 Brassica rapa FPsc
Brara.C03713 5.0kb downstream 5.0kb downstream 6797 true A03: 19116300-19123096 Brassica rapa FPsc
Brara.C03713 5.0kb downstream 5.0kb downstream 5000 false A03: 19116300-19121299 Brassica rapa FPsc
Brara.C03713 10.0kb upstream 10.0kb upstream 11797 true A03: 19121300-19133096 Brassica rapa FPsc
Brara.C03713 10.0kb upstream 10.0kb upstream 10000 false A03: 19123097-19133096 Brassica rapa FPsc
Brara.C03713 10.0kb downstream 10.0kb downstream 11797 true A03: 19111300-19123096 Brassica rapa FPsc
Brara.C03713 10.0kb downstream 10.0kb downstream 10000 false A03: 19111300-19121299 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377412 5261 Brassicaceae View MSA
123828065 5264 Brassicales-Malvales View MSA
124342904 5266 SBM View MSA
124237505 5268 Malvidae View MSA
124073365 5270 Rosid View MSA
123738870 5271 Pentapetalae View MSA
122790398 5272 Eudicot View MSA
122043036 5273 Angiosperm View MSA
121344362 5274 Embryophyte View MSA
123425402 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier