Gene : Brara.C03539 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED Genomic Order:  3539
Name:  ? Brara.C03539 Secondary Identifier:  ? PAC:30618044
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03539 0.5kb upstream 0.5kb upstream 3917 true A03: 18005516-18009432 Brassica rapa FPsc
Brara.C03539 0.5kb upstream 0.5kb upstream 500 false A03: 18008933-18009432 Brassica rapa FPsc
Brara.C03539 0.5kb downstream 0.5kb downstream 3917 true A03: 18005016-18008932 Brassica rapa FPsc
Brara.C03539 0.5kb downstream 0.5kb downstream 500 false A03: 18005016-18005515 Brassica rapa FPsc
Brara.C03539 1.0kb upstream 1.0kb upstream 4417 true A03: 18005516-18009932 Brassica rapa FPsc
Brara.C03539 1.0kb upstream 1.0kb upstream 1000 false A03: 18008933-18009932 Brassica rapa FPsc
Brara.C03539 1.0kb downstream 1.0kb downstream 4417 true A03: 18004516-18008932 Brassica rapa FPsc
Brara.C03539 1.0kb downstream 1.0kb downstream 1000 false A03: 18004516-18005515 Brassica rapa FPsc
Brara.C03539 2.0kb upstream 2.0kb upstream 5417 true A03: 18005516-18010932 Brassica rapa FPsc
Brara.C03539 2.0kb upstream 2.0kb upstream 2000 false A03: 18008933-18010932 Brassica rapa FPsc
Brara.C03539 2.0kb downstream 2.0kb downstream 5417 true A03: 18003516-18008932 Brassica rapa FPsc
Brara.C03539 2.0kb downstream 2.0kb downstream 2000 false A03: 18003516-18005515 Brassica rapa FPsc
Brara.C03539 5.0kb upstream 5.0kb upstream 8417 true A03: 18005516-18013932 Brassica rapa FPsc
Brara.C03539 5.0kb upstream 5.0kb upstream 5000 false A03: 18008933-18013932 Brassica rapa FPsc
Brara.C03539 5.0kb downstream 5.0kb downstream 8417 true A03: 18000516-18008932 Brassica rapa FPsc
Brara.C03539 5.0kb downstream 5.0kb downstream 5000 false A03: 18000516-18005515 Brassica rapa FPsc
Brara.C03539 10.0kb upstream 10.0kb upstream 13417 true A03: 18005516-18018932 Brassica rapa FPsc
Brara.C03539 10.0kb upstream 10.0kb upstream 10000 false A03: 18008933-18018932 Brassica rapa FPsc
Brara.C03539 10.0kb downstream 10.0kb downstream 13417 true A03: 17995516-18008932 Brassica rapa FPsc
Brara.C03539 10.0kb downstream 10.0kb downstream 10000 false A03: 17995516-18005515 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366524 5261 Brassicaceae View MSA
123799190 5264 Brassicales-Malvales View MSA
124296738 5266 SBM View MSA
124148806 5268 Malvidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier