Gene : Brara.F00054 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  54
Name:  ? Brara.F00054 Secondary Identifier:  ? PAC:30627982
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5173 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PYRUVDEHYD-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00054 0.5kb upstream 0.5kb upstream 4618 true A06: 398119-402736 Brassica rapa FPsc
Brara.F00054 0.5kb upstream 0.5kb upstream 500 false A06: 398119-398618 Brassica rapa FPsc
Brara.F00054 0.5kb downstream 0.5kb downstream 4618 true A06: 398619-403236 Brassica rapa FPsc
Brara.F00054 0.5kb downstream 0.5kb downstream 500 false A06: 402737-403236 Brassica rapa FPsc
Brara.F00054 1.0kb upstream 1.0kb upstream 5118 true A06: 397619-402736 Brassica rapa FPsc
Brara.F00054 1.0kb upstream 1.0kb upstream 1000 false A06: 397619-398618 Brassica rapa FPsc
Brara.F00054 1.0kb downstream 1.0kb downstream 5118 true A06: 398619-403736 Brassica rapa FPsc
Brara.F00054 1.0kb downstream 1.0kb downstream 1000 false A06: 402737-403736 Brassica rapa FPsc
Brara.F00054 2.0kb upstream 2.0kb upstream 6118 true A06: 396619-402736 Brassica rapa FPsc
Brara.F00054 2.0kb upstream 2.0kb upstream 2000 false A06: 396619-398618 Brassica rapa FPsc
Brara.F00054 2.0kb downstream 2.0kb downstream 6118 true A06: 398619-404736 Brassica rapa FPsc
Brara.F00054 2.0kb downstream 2.0kb downstream 2000 false A06: 402737-404736 Brassica rapa FPsc
Brara.F00054 5.0kb upstream 5.0kb upstream 9118 true A06: 393619-402736 Brassica rapa FPsc
Brara.F00054 5.0kb upstream 5.0kb upstream 5000 false A06: 393619-398618 Brassica rapa FPsc
Brara.F00054 5.0kb downstream 5.0kb downstream 9118 true A06: 398619-407736 Brassica rapa FPsc
Brara.F00054 5.0kb downstream 5.0kb downstream 5000 false A06: 402737-407736 Brassica rapa FPsc
Brara.F00054 10.0kb upstream 10.0kb upstream 14118 true A06: 388619-402736 Brassica rapa FPsc
Brara.F00054 10.0kb upstream 10.0kb upstream 10000 false A06: 388619-398618 Brassica rapa FPsc
Brara.F00054 10.0kb downstream 10.0kb downstream 14118 true A06: 398619-412736 Brassica rapa FPsc
Brara.F00054 10.0kb downstream 10.0kb downstream 10000 false A06: 402737-412736 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372168 5261 Brassicaceae View MSA
123835606 5264 Brassicales-Malvales View MSA
124344538 5266 SBM View MSA
124243608 5268 Malvidae View MSA
124061053 5270 Rosid View MSA
123739083 5271 Pentapetalae View MSA
122788575 5272 Eudicot View MSA
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier