Gene : Brara.E03658 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR24326:SF136 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54-RELATED Genomic Order:  3658
Name:  ? Brara.E03658 Secondary Identifier:  ? PAC:30625886
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03658 0.5kb upstream 0.5kb upstream 2241 true A05: 28436918-28439158 Brassica rapa FPsc
Brara.E03658 0.5kb upstream 0.5kb upstream 500 false A05: 28438659-28439158 Brassica rapa FPsc
Brara.E03658 0.5kb downstream 0.5kb downstream 2241 true A05: 28436418-28438658 Brassica rapa FPsc
Brara.E03658 0.5kb downstream 0.5kb downstream 500 false A05: 28436418-28436917 Brassica rapa FPsc
Brara.E03658 1.0kb upstream 1.0kb upstream 2741 true A05: 28436918-28439658 Brassica rapa FPsc
Brara.E03658 1.0kb upstream 1.0kb upstream 1000 false A05: 28438659-28439658 Brassica rapa FPsc
Brara.E03658 1.0kb downstream 1.0kb downstream 2741 true A05: 28435918-28438658 Brassica rapa FPsc
Brara.E03658 1.0kb downstream 1.0kb downstream 1000 false A05: 28435918-28436917 Brassica rapa FPsc
Brara.E03658 2.0kb upstream 2.0kb upstream 3741 true A05: 28436918-28440658 Brassica rapa FPsc
Brara.E03658 2.0kb upstream 2.0kb upstream 2000 false A05: 28438659-28440658 Brassica rapa FPsc
Brara.E03658 2.0kb downstream 2.0kb downstream 3741 true A05: 28434918-28438658 Brassica rapa FPsc
Brara.E03658 2.0kb downstream 2.0kb downstream 2000 false A05: 28434918-28436917 Brassica rapa FPsc
Brara.E03658 5.0kb upstream 5.0kb upstream 6741 true A05: 28436918-28443658 Brassica rapa FPsc
Brara.E03658 5.0kb upstream 5.0kb upstream 5000 false A05: 28438659-28443658 Brassica rapa FPsc
Brara.E03658 5.0kb downstream 5.0kb downstream 6741 true A05: 28431918-28438658 Brassica rapa FPsc
Brara.E03658 5.0kb downstream 5.0kb downstream 5000 false A05: 28431918-28436917 Brassica rapa FPsc
Brara.E03658 10.0kb upstream 10.0kb upstream 11741 true A05: 28436918-28448658 Brassica rapa FPsc
Brara.E03658 10.0kb upstream 10.0kb upstream 10000 false A05: 28438659-28448658 Brassica rapa FPsc
Brara.E03658 10.0kb downstream 10.0kb downstream 11741 true A05: 28426918-28438658 Brassica rapa FPsc
Brara.E03658 10.0kb downstream 10.0kb downstream 10000 false A05: 28426918-28436917 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349683 5261 Brassicaceae Singleton cluster - no MSA
123841004 5264 Brassicales-Malvales View MSA
124347057 5266 SBM View MSA
124248110 5268 Malvidae View MSA
124070886 5270 Rosid View MSA
123751160 5271 Pentapetalae View MSA
122797641 5272 Eudicot View MSA
122048587 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier