Gene : Brara.C04242 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12565:SF165 - TRANSCRIPTION FACTOR PIF7 Genomic Order:  4242
Name:  ? Brara.C04242 Secondary Identifier:  ? PAC:30618583
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04242 0.5kb upstream 0.5kb upstream 2821 true A03: 22334858-22337678 Brassica rapa FPsc
Brara.C04242 0.5kb upstream 0.5kb upstream 500 false A03: 22337179-22337678 Brassica rapa FPsc
Brara.C04242 0.5kb downstream 0.5kb downstream 2821 true A03: 22334358-22337178 Brassica rapa FPsc
Brara.C04242 0.5kb downstream 0.5kb downstream 500 false A03: 22334358-22334857 Brassica rapa FPsc
Brara.C04242 1.0kb upstream 1.0kb upstream 3321 true A03: 22334858-22338178 Brassica rapa FPsc
Brara.C04242 1.0kb upstream 1.0kb upstream 1000 false A03: 22337179-22338178 Brassica rapa FPsc
Brara.C04242 1.0kb downstream 1.0kb downstream 3321 true A03: 22333858-22337178 Brassica rapa FPsc
Brara.C04242 1.0kb downstream 1.0kb downstream 1000 false A03: 22333858-22334857 Brassica rapa FPsc
Brara.C04242 2.0kb upstream 2.0kb upstream 4321 true A03: 22334858-22339178 Brassica rapa FPsc
Brara.C04242 2.0kb upstream 2.0kb upstream 2000 false A03: 22337179-22339178 Brassica rapa FPsc
Brara.C04242 2.0kb downstream 2.0kb downstream 4321 true A03: 22332858-22337178 Brassica rapa FPsc
Brara.C04242 2.0kb downstream 2.0kb downstream 2000 false A03: 22332858-22334857 Brassica rapa FPsc
Brara.C04242 5.0kb upstream 5.0kb upstream 7321 true A03: 22334858-22342178 Brassica rapa FPsc
Brara.C04242 5.0kb upstream 5.0kb upstream 5000 false A03: 22337179-22342178 Brassica rapa FPsc
Brara.C04242 5.0kb downstream 5.0kb downstream 7321 true A03: 22329858-22337178 Brassica rapa FPsc
Brara.C04242 5.0kb downstream 5.0kb downstream 5000 false A03: 22329858-22334857 Brassica rapa FPsc
Brara.C04242 10.0kb upstream 10.0kb upstream 12321 true A03: 22334858-22347178 Brassica rapa FPsc
Brara.C04242 10.0kb upstream 10.0kb upstream 10000 false A03: 22337179-22347178 Brassica rapa FPsc
Brara.C04242 10.0kb downstream 10.0kb downstream 12321 true A03: 22324858-22337178 Brassica rapa FPsc
Brara.C04242 10.0kb downstream 10.0kb downstream 10000 false A03: 22324858-22334857 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360425 5261 Brassicaceae View MSA
123836621 5264 Brassicales-Malvales View MSA
124350878 5266 SBM View MSA
124246929 5268 Malvidae View MSA
124071102 5270 Rosid View MSA
123749282 5271 Pentapetalae View MSA
122787317 5272 Eudicot View MSA
122050189 5273 Angiosperm View MSA
121311789 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier