Gene : Brara.C04273 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR13697:SF33 - 6-PHOSPHOFRUCTOKINASE 4, CHLOROPLASTIC Genomic Order:  4273
Name:  ? Brara.C04273 Secondary Identifier:  ? PAC:30618165
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ANAEROFRUCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ANAGLYCOLYSIS-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04273 0.5kb upstream 0.5kb upstream 3608 true A03: 22510448-22514055 Brassica rapa FPsc
Brara.C04273 0.5kb upstream 0.5kb upstream 500 false A03: 22510448-22510947 Brassica rapa FPsc
Brara.C04273 0.5kb downstream 0.5kb downstream 3608 true A03: 22510948-22514555 Brassica rapa FPsc
Brara.C04273 0.5kb downstream 0.5kb downstream 500 false A03: 22514056-22514555 Brassica rapa FPsc
Brara.C04273 1.0kb upstream 1.0kb upstream 4108 true A03: 22509948-22514055 Brassica rapa FPsc
Brara.C04273 1.0kb upstream 1.0kb upstream 1000 false A03: 22509948-22510947 Brassica rapa FPsc
Brara.C04273 1.0kb downstream 1.0kb downstream 4108 true A03: 22510948-22515055 Brassica rapa FPsc
Brara.C04273 1.0kb downstream 1.0kb downstream 1000 false A03: 22514056-22515055 Brassica rapa FPsc
Brara.C04273 2.0kb upstream 2.0kb upstream 5108 true A03: 22508948-22514055 Brassica rapa FPsc
Brara.C04273 2.0kb upstream 2.0kb upstream 2000 false A03: 22508948-22510947 Brassica rapa FPsc
Brara.C04273 2.0kb downstream 2.0kb downstream 5108 true A03: 22510948-22516055 Brassica rapa FPsc
Brara.C04273 2.0kb downstream 2.0kb downstream 2000 false A03: 22514056-22516055 Brassica rapa FPsc
Brara.C04273 5.0kb upstream 5.0kb upstream 8108 true A03: 22505948-22514055 Brassica rapa FPsc
Brara.C04273 5.0kb upstream 5.0kb upstream 5000 false A03: 22505948-22510947 Brassica rapa FPsc
Brara.C04273 5.0kb downstream 5.0kb downstream 8108 true A03: 22510948-22519055 Brassica rapa FPsc
Brara.C04273 5.0kb downstream 5.0kb downstream 5000 false A03: 22514056-22519055 Brassica rapa FPsc
Brara.C04273 10.0kb upstream 10.0kb upstream 13108 true A03: 22500948-22514055 Brassica rapa FPsc
Brara.C04273 10.0kb upstream 10.0kb upstream 10000 false A03: 22500948-22510947 Brassica rapa FPsc
Brara.C04273 10.0kb downstream 10.0kb downstream 13108 true A03: 22510948-22524055 Brassica rapa FPsc
Brara.C04273 10.0kb downstream 10.0kb downstream 10000 false A03: 22514056-22524055 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370968 5261 Brassicaceae View MSA
123827709 5264 Brassicales-Malvales View MSA
124346547 5266 SBM View MSA
124240678 5268 Malvidae View MSA
124067240 5270 Rosid View MSA
123738988 5271 Pentapetalae View MSA
122769940 5272 Eudicot View MSA
122042097 5273 Angiosperm View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier