Gene : Brara.C04172 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR31618:SF1 - MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  4172
Name:  ? Brara.C04172 Secondary Identifier:  ? PAC:30615457
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04172 0.5kb upstream 0.5kb upstream 3944 true A03: 21961134-21965077 Brassica rapa FPsc
Brara.C04172 0.5kb upstream 0.5kb upstream 500 false A03: 21964578-21965077 Brassica rapa FPsc
Brara.C04172 0.5kb downstream 0.5kb downstream 3944 true A03: 21960634-21964577 Brassica rapa FPsc
Brara.C04172 0.5kb downstream 0.5kb downstream 500 false A03: 21960634-21961133 Brassica rapa FPsc
Brara.C04172 1.0kb upstream 1.0kb upstream 4444 true A03: 21961134-21965577 Brassica rapa FPsc
Brara.C04172 1.0kb upstream 1.0kb upstream 1000 false A03: 21964578-21965577 Brassica rapa FPsc
Brara.C04172 1.0kb downstream 1.0kb downstream 4444 true A03: 21960134-21964577 Brassica rapa FPsc
Brara.C04172 1.0kb downstream 1.0kb downstream 1000 false A03: 21960134-21961133 Brassica rapa FPsc
Brara.C04172 2.0kb upstream 2.0kb upstream 5444 true A03: 21961134-21966577 Brassica rapa FPsc
Brara.C04172 2.0kb upstream 2.0kb upstream 2000 false A03: 21964578-21966577 Brassica rapa FPsc
Brara.C04172 2.0kb downstream 2.0kb downstream 5444 true A03: 21959134-21964577 Brassica rapa FPsc
Brara.C04172 2.0kb downstream 2.0kb downstream 2000 false A03: 21959134-21961133 Brassica rapa FPsc
Brara.C04172 5.0kb upstream 5.0kb upstream 8444 true A03: 21961134-21969577 Brassica rapa FPsc
Brara.C04172 5.0kb upstream 5.0kb upstream 5000 false A03: 21964578-21969577 Brassica rapa FPsc
Brara.C04172 5.0kb downstream 5.0kb downstream 8444 true A03: 21956134-21964577 Brassica rapa FPsc
Brara.C04172 5.0kb downstream 5.0kb downstream 5000 false A03: 21956134-21961133 Brassica rapa FPsc
Brara.C04172 10.0kb upstream 10.0kb upstream 13444 true A03: 21961134-21974577 Brassica rapa FPsc
Brara.C04172 10.0kb upstream 10.0kb upstream 10000 false A03: 21964578-21974577 Brassica rapa FPsc
Brara.C04172 10.0kb downstream 10.0kb downstream 13444 true A03: 21951134-21964577 Brassica rapa FPsc
Brara.C04172 10.0kb downstream 10.0kb downstream 10000 false A03: 21951134-21961133 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346939 5261 Brassicaceae Singleton cluster - no MSA
123842537 5264 Brassicales-Malvales View MSA
124350910 5266 SBM View MSA
124253835 5268 Malvidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier