Gene : Brara.F00307 B. rapa FPsc v1.3
Defline:  (1 of 2) KOG0421 - Ubiquitin-protein ligase Genomic Order:  307
Name:  ? Brara.F00307 Secondary Identifier:  ? PAC:30630158
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00307 0.5kb upstream 0.5kb upstream 1965 true A06: 1769952-1771916 Brassica rapa FPsc
Brara.F00307 0.5kb upstream 0.5kb upstream 500 false A06: 1769952-1770451 Brassica rapa FPsc
Brara.F00307 0.5kb downstream 0.5kb downstream 1965 true A06: 1770452-1772416 Brassica rapa FPsc
Brara.F00307 0.5kb downstream 0.5kb downstream 500 false A06: 1771917-1772416 Brassica rapa FPsc
Brara.F00307 1.0kb upstream 1.0kb upstream 2465 true A06: 1769452-1771916 Brassica rapa FPsc
Brara.F00307 1.0kb upstream 1.0kb upstream 1000 false A06: 1769452-1770451 Brassica rapa FPsc
Brara.F00307 1.0kb downstream 1.0kb downstream 2465 true A06: 1770452-1772916 Brassica rapa FPsc
Brara.F00307 1.0kb downstream 1.0kb downstream 1000 false A06: 1771917-1772916 Brassica rapa FPsc
Brara.F00307 2.0kb upstream 2.0kb upstream 3465 true A06: 1768452-1771916 Brassica rapa FPsc
Brara.F00307 2.0kb upstream 2.0kb upstream 2000 false A06: 1768452-1770451 Brassica rapa FPsc
Brara.F00307 2.0kb downstream 2.0kb downstream 3465 true A06: 1770452-1773916 Brassica rapa FPsc
Brara.F00307 2.0kb downstream 2.0kb downstream 2000 false A06: 1771917-1773916 Brassica rapa FPsc
Brara.F00307 5.0kb upstream 5.0kb upstream 6465 true A06: 1765452-1771916 Brassica rapa FPsc
Brara.F00307 5.0kb upstream 5.0kb upstream 5000 false A06: 1765452-1770451 Brassica rapa FPsc
Brara.F00307 5.0kb downstream 5.0kb downstream 6465 true A06: 1770452-1776916 Brassica rapa FPsc
Brara.F00307 5.0kb downstream 5.0kb downstream 5000 false A06: 1771917-1776916 Brassica rapa FPsc
Brara.F00307 10.0kb upstream 10.0kb upstream 11465 true A06: 1760452-1771916 Brassica rapa FPsc
Brara.F00307 10.0kb upstream 10.0kb upstream 10000 false A06: 1760452-1770451 Brassica rapa FPsc
Brara.F00307 10.0kb downstream 10.0kb downstream 11465 true A06: 1770452-1781916 Brassica rapa FPsc
Brara.F00307 10.0kb downstream 10.0kb downstream 10000 false A06: 1771917-1781916 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378746 5261 Brassicaceae View MSA
123838520 5264 Brassicales-Malvales View MSA
124340055 5266 SBM View MSA
124250990 5268 Malvidae View MSA
124064944 5270 Rosid View MSA
123741729 5271 Pentapetalae View MSA
122792532 5272 Eudicot View MSA
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier