Gene : Brara.C04016 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11712:SF275 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE, MITOCHONDRIAL Genomic Order:  4016
Name:  ? Brara.C04016 Secondary Identifier:  ? PAC:30616452
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc FASYN-ELONG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5971 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5989 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6282 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7388 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7663 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04016 0.5kb upstream 0.5kb upstream 3382 true A03: 20960479-20963860 Brassica rapa FPsc
Brara.C04016 0.5kb upstream 0.5kb upstream 500 false A03: 20963361-20963860 Brassica rapa FPsc
Brara.C04016 0.5kb downstream 0.5kb downstream 3382 true A03: 20959979-20963360 Brassica rapa FPsc
Brara.C04016 0.5kb downstream 0.5kb downstream 500 false A03: 20959979-20960478 Brassica rapa FPsc
Brara.C04016 1.0kb upstream 1.0kb upstream 3882 true A03: 20960479-20964360 Brassica rapa FPsc
Brara.C04016 1.0kb upstream 1.0kb upstream 1000 false A03: 20963361-20964360 Brassica rapa FPsc
Brara.C04016 1.0kb downstream 1.0kb downstream 3882 true A03: 20959479-20963360 Brassica rapa FPsc
Brara.C04016 1.0kb downstream 1.0kb downstream 1000 false A03: 20959479-20960478 Brassica rapa FPsc
Brara.C04016 2.0kb upstream 2.0kb upstream 4882 true A03: 20960479-20965360 Brassica rapa FPsc
Brara.C04016 2.0kb upstream 2.0kb upstream 2000 false A03: 20963361-20965360 Brassica rapa FPsc
Brara.C04016 2.0kb downstream 2.0kb downstream 4882 true A03: 20958479-20963360 Brassica rapa FPsc
Brara.C04016 2.0kb downstream 2.0kb downstream 2000 false A03: 20958479-20960478 Brassica rapa FPsc
Brara.C04016 5.0kb upstream 5.0kb upstream 7882 true A03: 20960479-20968360 Brassica rapa FPsc
Brara.C04016 5.0kb upstream 5.0kb upstream 5000 false A03: 20963361-20968360 Brassica rapa FPsc
Brara.C04016 5.0kb downstream 5.0kb downstream 7882 true A03: 20955479-20963360 Brassica rapa FPsc
Brara.C04016 5.0kb downstream 5.0kb downstream 5000 false A03: 20955479-20960478 Brassica rapa FPsc
Brara.C04016 10.0kb upstream 10.0kb upstream 12882 true A03: 20960479-20973360 Brassica rapa FPsc
Brara.C04016 10.0kb upstream 10.0kb upstream 10000 false A03: 20963361-20973360 Brassica rapa FPsc
Brara.C04016 10.0kb downstream 10.0kb downstream 12882 true A03: 20950479-20963360 Brassica rapa FPsc
Brara.C04016 10.0kb downstream 10.0kb downstream 10000 false A03: 20950479-20960478 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371309 5261 Brassicaceae View MSA
123829991 5264 Brassicales-Malvales View MSA
124344955 5266 SBM View MSA
124240268 5268 Malvidae View MSA
124060523 5270 Rosid View MSA
123738041 5271 Pentapetalae View MSA
122786623 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier