Gene : Brara.C04084 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  4084
Name:  ? Brara.C04084 Secondary Identifier:  ? PAC:30618082
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5097 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-724 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04084 0.5kb upstream 0.5kb upstream 4631 true A03: 21310411-21315041 Brassica rapa FPsc
Brara.C04084 0.5kb upstream 0.5kb upstream 500 false A03: 21310411-21310910 Brassica rapa FPsc
Brara.C04084 0.5kb downstream 0.5kb downstream 4631 true A03: 21310911-21315541 Brassica rapa FPsc
Brara.C04084 0.5kb downstream 0.5kb downstream 500 false A03: 21315042-21315541 Brassica rapa FPsc
Brara.C04084 1.0kb upstream 1.0kb upstream 5131 true A03: 21309911-21315041 Brassica rapa FPsc
Brara.C04084 1.0kb upstream 1.0kb upstream 1000 false A03: 21309911-21310910 Brassica rapa FPsc
Brara.C04084 1.0kb downstream 1.0kb downstream 5131 true A03: 21310911-21316041 Brassica rapa FPsc
Brara.C04084 1.0kb downstream 1.0kb downstream 1000 false A03: 21315042-21316041 Brassica rapa FPsc
Brara.C04084 2.0kb upstream 2.0kb upstream 6131 true A03: 21308911-21315041 Brassica rapa FPsc
Brara.C04084 2.0kb upstream 2.0kb upstream 2000 false A03: 21308911-21310910 Brassica rapa FPsc
Brara.C04084 2.0kb downstream 2.0kb downstream 6131 true A03: 21310911-21317041 Brassica rapa FPsc
Brara.C04084 2.0kb downstream 2.0kb downstream 2000 false A03: 21315042-21317041 Brassica rapa FPsc
Brara.C04084 5.0kb upstream 5.0kb upstream 9131 true A03: 21305911-21315041 Brassica rapa FPsc
Brara.C04084 5.0kb upstream 5.0kb upstream 5000 false A03: 21305911-21310910 Brassica rapa FPsc
Brara.C04084 5.0kb downstream 5.0kb downstream 9131 true A03: 21310911-21320041 Brassica rapa FPsc
Brara.C04084 5.0kb downstream 5.0kb downstream 5000 false A03: 21315042-21320041 Brassica rapa FPsc
Brara.C04084 10.0kb upstream 10.0kb upstream 14131 true A03: 21300911-21315041 Brassica rapa FPsc
Brara.C04084 10.0kb upstream 10.0kb upstream 10000 false A03: 21300911-21310910 Brassica rapa FPsc
Brara.C04084 10.0kb downstream 10.0kb downstream 14131 true A03: 21310911-21325041 Brassica rapa FPsc
Brara.C04084 10.0kb downstream 10.0kb downstream 10000 false A03: 21315042-21325041 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373428 5261 Brassicaceae View MSA
123832245 5264 Brassicales-Malvales View MSA
124350184 5266 SBM View MSA
124244486 5268 Malvidae View MSA
124072103 5270 Rosid View MSA
123748238 5271 Pentapetalae View MSA
122790748 5272 Eudicot View MSA
122049713 5273 Angiosperm View MSA
121311556 5274 Embryophyte View MSA
123348837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier