Gene : Brara.C03922 B. rapa FPsc v1.3
Defline:  (1 of 2) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  3922
Name:  ? Brara.C03922 Secondary Identifier:  ? PAC:30615670
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6622 Brassica rapa FPsc pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03922 0.5kb upstream 0.5kb upstream 5380 true A03: 20381785-20387164 Brassica rapa FPsc
Brara.C03922 0.5kb upstream 0.5kb upstream 500 false A03: 20381785-20382284 Brassica rapa FPsc
Brara.C03922 0.5kb downstream 0.5kb downstream 5380 true A03: 20382285-20387664 Brassica rapa FPsc
Brara.C03922 0.5kb downstream 0.5kb downstream 500 false A03: 20387165-20387664 Brassica rapa FPsc
Brara.C03922 1.0kb upstream 1.0kb upstream 5880 true A03: 20381285-20387164 Brassica rapa FPsc
Brara.C03922 1.0kb upstream 1.0kb upstream 1000 false A03: 20381285-20382284 Brassica rapa FPsc
Brara.C03922 1.0kb downstream 1.0kb downstream 5880 true A03: 20382285-20388164 Brassica rapa FPsc
Brara.C03922 1.0kb downstream 1.0kb downstream 1000 false A03: 20387165-20388164 Brassica rapa FPsc
Brara.C03922 2.0kb upstream 2.0kb upstream 6880 true A03: 20380285-20387164 Brassica rapa FPsc
Brara.C03922 2.0kb upstream 2.0kb upstream 2000 false A03: 20380285-20382284 Brassica rapa FPsc
Brara.C03922 2.0kb downstream 2.0kb downstream 6880 true A03: 20382285-20389164 Brassica rapa FPsc
Brara.C03922 2.0kb downstream 2.0kb downstream 2000 false A03: 20387165-20389164 Brassica rapa FPsc
Brara.C03922 5.0kb upstream 5.0kb upstream 9880 true A03: 20377285-20387164 Brassica rapa FPsc
Brara.C03922 5.0kb upstream 5.0kb upstream 5000 false A03: 20377285-20382284 Brassica rapa FPsc
Brara.C03922 5.0kb downstream 5.0kb downstream 9880 true A03: 20382285-20392164 Brassica rapa FPsc
Brara.C03922 5.0kb downstream 5.0kb downstream 5000 false A03: 20387165-20392164 Brassica rapa FPsc
Brara.C03922 10.0kb upstream 10.0kb upstream 14880 true A03: 20372285-20387164 Brassica rapa FPsc
Brara.C03922 10.0kb upstream 10.0kb upstream 10000 false A03: 20372285-20382284 Brassica rapa FPsc
Brara.C03922 10.0kb downstream 10.0kb downstream 14880 true A03: 20382285-20397164 Brassica rapa FPsc
Brara.C03922 10.0kb downstream 10.0kb downstream 10000 false A03: 20387165-20397164 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372765 5261 Brassicaceae View MSA
123834953 5264 Brassicales-Malvales View MSA
124346454 5266 SBM View MSA
124243383 5268 Malvidae View MSA
124063017 5270 Rosid View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier