Gene : Brara.F00254 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR31403:SF6 - PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC Genomic Order:  254
Name:  ? Brara.F00254 Secondary Identifier:  ? PAC:30628456
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  
BrapaFPsc LIPASYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6803 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00254 0.5kb upstream 0.5kb upstream 2170 true A06: 1462361-1464530 Brassica rapa FPsc
Brara.F00254 0.5kb upstream 0.5kb upstream 500 false A06: 1464031-1464530 Brassica rapa FPsc
Brara.F00254 0.5kb downstream 0.5kb downstream 2170 true A06: 1461861-1464030 Brassica rapa FPsc
Brara.F00254 0.5kb downstream 0.5kb downstream 500 false A06: 1461861-1462360 Brassica rapa FPsc
Brara.F00254 1.0kb upstream 1.0kb upstream 2670 true A06: 1462361-1465030 Brassica rapa FPsc
Brara.F00254 1.0kb upstream 1.0kb upstream 1000 false A06: 1464031-1465030 Brassica rapa FPsc
Brara.F00254 1.0kb downstream 1.0kb downstream 2670 true A06: 1461361-1464030 Brassica rapa FPsc
Brara.F00254 1.0kb downstream 1.0kb downstream 1000 false A06: 1461361-1462360 Brassica rapa FPsc
Brara.F00254 2.0kb upstream 2.0kb upstream 3670 true A06: 1462361-1466030 Brassica rapa FPsc
Brara.F00254 2.0kb upstream 2.0kb upstream 2000 false A06: 1464031-1466030 Brassica rapa FPsc
Brara.F00254 2.0kb downstream 2.0kb downstream 3670 true A06: 1460361-1464030 Brassica rapa FPsc
Brara.F00254 2.0kb downstream 2.0kb downstream 2000 false A06: 1460361-1462360 Brassica rapa FPsc
Brara.F00254 5.0kb upstream 5.0kb upstream 6670 true A06: 1462361-1469030 Brassica rapa FPsc
Brara.F00254 5.0kb upstream 5.0kb upstream 5000 false A06: 1464031-1469030 Brassica rapa FPsc
Brara.F00254 5.0kb downstream 5.0kb downstream 6670 true A06: 1457361-1464030 Brassica rapa FPsc
Brara.F00254 5.0kb downstream 5.0kb downstream 5000 false A06: 1457361-1462360 Brassica rapa FPsc
Brara.F00254 10.0kb upstream 10.0kb upstream 11670 true A06: 1462361-1474030 Brassica rapa FPsc
Brara.F00254 10.0kb upstream 10.0kb upstream 10000 false A06: 1464031-1474030 Brassica rapa FPsc
Brara.F00254 10.0kb downstream 10.0kb downstream 11670 true A06: 1452361-1464030 Brassica rapa FPsc
Brara.F00254 10.0kb downstream 10.0kb downstream 10000 false A06: 1452361-1462360 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372196 5261 Brassicaceae View MSA
123831765 5264 Brassicales-Malvales View MSA
124341811 5266 SBM View MSA
124244577 5268 Malvidae View MSA
124070138 5270 Rosid View MSA
123750987 5271 Pentapetalae View MSA
122791980 5272 Eudicot View MSA
122045871 5273 Angiosperm View MSA
121350475 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier