Gene : Brara.C03946 B. rapa FPsc v1.3
Defline:  (1 of 2) 6.3.5.7 - Glutaminyl-tRNA synthase (glutamine-hydrolyzing) / Glutamyl-tRNA(Gln) amidotransferase Genomic Order:  3946
Name:  ? Brara.C03946 Secondary Identifier:  ? PAC:30616754
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5921 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03946 0.5kb upstream 0.5kb upstream 2958 true A03: 20546848-20549805 Brassica rapa FPsc
Brara.C03946 0.5kb upstream 0.5kb upstream 500 false A03: 20546848-20547347 Brassica rapa FPsc
Brara.C03946 0.5kb downstream 0.5kb downstream 2958 true A03: 20547348-20550305 Brassica rapa FPsc
Brara.C03946 0.5kb downstream 0.5kb downstream 500 false A03: 20549806-20550305 Brassica rapa FPsc
Brara.C03946 1.0kb upstream 1.0kb upstream 3458 true A03: 20546348-20549805 Brassica rapa FPsc
Brara.C03946 1.0kb upstream 1.0kb upstream 1000 false A03: 20546348-20547347 Brassica rapa FPsc
Brara.C03946 1.0kb downstream 1.0kb downstream 3458 true A03: 20547348-20550805 Brassica rapa FPsc
Brara.C03946 1.0kb downstream 1.0kb downstream 1000 false A03: 20549806-20550805 Brassica rapa FPsc
Brara.C03946 2.0kb upstream 2.0kb upstream 4458 true A03: 20545348-20549805 Brassica rapa FPsc
Brara.C03946 2.0kb upstream 2.0kb upstream 2000 false A03: 20545348-20547347 Brassica rapa FPsc
Brara.C03946 2.0kb downstream 2.0kb downstream 4458 true A03: 20547348-20551805 Brassica rapa FPsc
Brara.C03946 2.0kb downstream 2.0kb downstream 2000 false A03: 20549806-20551805 Brassica rapa FPsc
Brara.C03946 5.0kb upstream 5.0kb upstream 7458 true A03: 20542348-20549805 Brassica rapa FPsc
Brara.C03946 5.0kb upstream 5.0kb upstream 5000 false A03: 20542348-20547347 Brassica rapa FPsc
Brara.C03946 5.0kb downstream 5.0kb downstream 7458 true A03: 20547348-20554805 Brassica rapa FPsc
Brara.C03946 5.0kb downstream 5.0kb downstream 5000 false A03: 20549806-20554805 Brassica rapa FPsc
Brara.C03946 10.0kb upstream 10.0kb upstream 12458 true A03: 20537348-20549805 Brassica rapa FPsc
Brara.C03946 10.0kb upstream 10.0kb upstream 10000 false A03: 20537348-20547347 Brassica rapa FPsc
Brara.C03946 10.0kb downstream 10.0kb downstream 12458 true A03: 20547348-20559805 Brassica rapa FPsc
Brara.C03946 10.0kb downstream 10.0kb downstream 10000 false A03: 20549806-20559805 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372656 5261 Brassicaceae View MSA
123832013 5264 Brassicales-Malvales View MSA
124339604 5266 SBM View MSA
124241399 5268 Malvidae View MSA
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier