Gene : Brara.D00012 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.14.11.23//1.14.11.9 - Flavonol synthase / FLS // Flavanone 3-dioxygenase / Naringenin,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) Genomic Order:  12
Name:  ? Brara.D00012 Secondary Identifier:  ? PAC:30622556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY1F-823 Brassica rapa FPsc pathologic  
BrapaFPsc PWY1F-FLAVSYN Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3101 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5059 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5152 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5390 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6787 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00012 0.5kb upstream 0.5kb upstream 2384 true A04: 58792-61175 Brassica rapa FPsc
Brara.D00012 0.5kb upstream 0.5kb upstream 500 false A04: 60676-61175 Brassica rapa FPsc
Brara.D00012 0.5kb downstream 0.5kb downstream 2384 true A04: 58292-60675 Brassica rapa FPsc
Brara.D00012 0.5kb downstream 0.5kb downstream 500 false A04: 58292-58791 Brassica rapa FPsc
Brara.D00012 1.0kb upstream 1.0kb upstream 2884 true A04: 58792-61675 Brassica rapa FPsc
Brara.D00012 1.0kb upstream 1.0kb upstream 1000 false A04: 60676-61675 Brassica rapa FPsc
Brara.D00012 1.0kb downstream 1.0kb downstream 2884 true A04: 57792-60675 Brassica rapa FPsc
Brara.D00012 1.0kb downstream 1.0kb downstream 1000 false A04: 57792-58791 Brassica rapa FPsc
Brara.D00012 2.0kb upstream 2.0kb upstream 3884 true A04: 58792-62675 Brassica rapa FPsc
Brara.D00012 2.0kb upstream 2.0kb upstream 2000 false A04: 60676-62675 Brassica rapa FPsc
Brara.D00012 2.0kb downstream 2.0kb downstream 3884 true A04: 56792-60675 Brassica rapa FPsc
Brara.D00012 2.0kb downstream 2.0kb downstream 2000 false A04: 56792-58791 Brassica rapa FPsc
Brara.D00012 5.0kb upstream 5.0kb upstream 6884 true A04: 58792-65675 Brassica rapa FPsc
Brara.D00012 5.0kb upstream 5.0kb upstream 5000 false A04: 60676-65675 Brassica rapa FPsc
Brara.D00012 5.0kb downstream 5.0kb downstream 6884 true A04: 53792-60675 Brassica rapa FPsc
Brara.D00012 5.0kb downstream 5.0kb downstream 5000 false A04: 53792-58791 Brassica rapa FPsc
Brara.D00012 10.0kb upstream 10.0kb upstream 11884 true A04: 58792-70675 Brassica rapa FPsc
Brara.D00012 10.0kb upstream 10.0kb upstream 10000 false A04: 60676-70675 Brassica rapa FPsc
Brara.D00012 10.0kb downstream 10.0kb downstream 11884 true A04: 48792-60675 Brassica rapa FPsc
Brara.D00012 10.0kb downstream 10.0kb downstream 10000 false A04: 48792-58791 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365742 5261 Brassicaceae View MSA
123831676 5264 Brassicales-Malvales View MSA
124343141 5266 SBM View MSA
124239498 5268 Malvidae View MSA
124069152 5270 Rosid View MSA
123740293 5271 Pentapetalae View MSA
122792484 5272 Eudicot View MSA
122045457 5273 Angiosperm View MSA
121347925 5274 Embryophyte View MSA
123428862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier