Gene : Brara.D00011 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Genomic Order:  11
Name:  ? Brara.D00011 Secondary Identifier:  ? PAC:30622635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00011 0.5kb upstream 0.5kb upstream 3143 true A04: 54941-58083 Brassica rapa FPsc
Brara.D00011 0.5kb upstream 0.5kb upstream 500 false A04: 57584-58083 Brassica rapa FPsc
Brara.D00011 0.5kb downstream 0.5kb downstream 3143 true A04: 54441-57583 Brassica rapa FPsc
Brara.D00011 0.5kb downstream 0.5kb downstream 500 false A04: 54441-54940 Brassica rapa FPsc
Brara.D00011 1.0kb upstream 1.0kb upstream 3643 true A04: 54941-58583 Brassica rapa FPsc
Brara.D00011 1.0kb upstream 1.0kb upstream 1000 false A04: 57584-58583 Brassica rapa FPsc
Brara.D00011 1.0kb downstream 1.0kb downstream 3643 true A04: 53941-57583 Brassica rapa FPsc
Brara.D00011 1.0kb downstream 1.0kb downstream 1000 false A04: 53941-54940 Brassica rapa FPsc
Brara.D00011 2.0kb upstream 2.0kb upstream 4643 true A04: 54941-59583 Brassica rapa FPsc
Brara.D00011 2.0kb upstream 2.0kb upstream 2000 false A04: 57584-59583 Brassica rapa FPsc
Brara.D00011 2.0kb downstream 2.0kb downstream 4643 true A04: 52941-57583 Brassica rapa FPsc
Brara.D00011 2.0kb downstream 2.0kb downstream 2000 false A04: 52941-54940 Brassica rapa FPsc
Brara.D00011 5.0kb upstream 5.0kb upstream 7643 true A04: 54941-62583 Brassica rapa FPsc
Brara.D00011 5.0kb upstream 5.0kb upstream 5000 false A04: 57584-62583 Brassica rapa FPsc
Brara.D00011 5.0kb downstream 5.0kb downstream 7643 true A04: 49941-57583 Brassica rapa FPsc
Brara.D00011 5.0kb downstream 5.0kb downstream 5000 false A04: 49941-54940 Brassica rapa FPsc
Brara.D00011 10.0kb upstream 10.0kb upstream 12643 true A04: 54941-67583 Brassica rapa FPsc
Brara.D00011 10.0kb upstream 10.0kb upstream 10000 false A04: 57584-67583 Brassica rapa FPsc
Brara.D00011 10.0kb downstream 10.0kb downstream 12643 true A04: 44941-57583 Brassica rapa FPsc
Brara.D00011 10.0kb downstream 10.0kb downstream 10000 false A04: 44941-54940 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361104 5261 Brassicaceae View MSA
123827461 5264 Brassicales-Malvales View MSA
124338538 5266 SBM View MSA
124254442 5268 Malvidae View MSA
124061946 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier