Gene : Brara.D00043 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12419:SF10 - PROTEIN OTUB-3, ISOFORM B Genomic Order:  43
Name:  ? Brara.D00043 Secondary Identifier:  ? PAC:30621957
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00043 0.5kb upstream 0.5kb upstream 2293 true A04: 291244-293536 Brassica rapa FPsc
Brara.D00043 0.5kb upstream 0.5kb upstream 500 false A04: 291244-291743 Brassica rapa FPsc
Brara.D00043 0.5kb downstream 0.5kb downstream 2293 true A04: 291744-294036 Brassica rapa FPsc
Brara.D00043 0.5kb downstream 0.5kb downstream 500 false A04: 293537-294036 Brassica rapa FPsc
Brara.D00043 1.0kb upstream 1.0kb upstream 2793 true A04: 290744-293536 Brassica rapa FPsc
Brara.D00043 1.0kb upstream 1.0kb upstream 1000 false A04: 290744-291743 Brassica rapa FPsc
Brara.D00043 1.0kb downstream 1.0kb downstream 2793 true A04: 291744-294536 Brassica rapa FPsc
Brara.D00043 1.0kb downstream 1.0kb downstream 1000 false A04: 293537-294536 Brassica rapa FPsc
Brara.D00043 2.0kb upstream 2.0kb upstream 3793 true A04: 289744-293536 Brassica rapa FPsc
Brara.D00043 2.0kb upstream 2.0kb upstream 2000 false A04: 289744-291743 Brassica rapa FPsc
Brara.D00043 2.0kb downstream 2.0kb downstream 3793 true A04: 291744-295536 Brassica rapa FPsc
Brara.D00043 2.0kb downstream 2.0kb downstream 2000 false A04: 293537-295536 Brassica rapa FPsc
Brara.D00043 5.0kb upstream 5.0kb upstream 6793 true A04: 286744-293536 Brassica rapa FPsc
Brara.D00043 5.0kb upstream 5.0kb upstream 5000 false A04: 286744-291743 Brassica rapa FPsc
Brara.D00043 5.0kb downstream 5.0kb downstream 6793 true A04: 291744-298536 Brassica rapa FPsc
Brara.D00043 5.0kb downstream 5.0kb downstream 5000 false A04: 293537-298536 Brassica rapa FPsc
Brara.D00043 10.0kb upstream 10.0kb upstream 11793 true A04: 281744-293536 Brassica rapa FPsc
Brara.D00043 10.0kb upstream 10.0kb upstream 10000 false A04: 281744-291743 Brassica rapa FPsc
Brara.D00043 10.0kb downstream 10.0kb downstream 11793 true A04: 291744-303536 Brassica rapa FPsc
Brara.D00043 10.0kb downstream 10.0kb downstream 10000 false A04: 293537-303536 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348743 5261 Brassicaceae Singleton cluster - no MSA
123788035 5264 Brassicales-Malvales Singleton cluster - no MSA
124286079 5266 SBM Singleton cluster - no MSA
124140018 5268 Malvidae Singleton cluster - no MSA
124062666 5270 Rosid View MSA
123738342 5271 Pentapetalae View MSA
122787520 5272 Eudicot View MSA
122043014 5273 Angiosperm View MSA
121346407 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier