Gene : Brara.D00050 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11614:SF88 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  50
Name:  ? Brara.D00050 Secondary Identifier:  ? PAC:30621063
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7420 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00050 0.5kb upstream 0.5kb upstream 3654 true A04: 304883-308536 Brassica rapa FPsc
Brara.D00050 0.5kb upstream 0.5kb upstream 500 false A04: 304883-305382 Brassica rapa FPsc
Brara.D00050 0.5kb downstream 0.5kb downstream 3654 true A04: 305383-309036 Brassica rapa FPsc
Brara.D00050 0.5kb downstream 0.5kb downstream 500 false A04: 308537-309036 Brassica rapa FPsc
Brara.D00050 1.0kb upstream 1.0kb upstream 4154 true A04: 304383-308536 Brassica rapa FPsc
Brara.D00050 1.0kb upstream 1.0kb upstream 1000 false A04: 304383-305382 Brassica rapa FPsc
Brara.D00050 1.0kb downstream 1.0kb downstream 4154 true A04: 305383-309536 Brassica rapa FPsc
Brara.D00050 1.0kb downstream 1.0kb downstream 1000 false A04: 308537-309536 Brassica rapa FPsc
Brara.D00050 2.0kb upstream 2.0kb upstream 5154 true A04: 303383-308536 Brassica rapa FPsc
Brara.D00050 2.0kb upstream 2.0kb upstream 2000 false A04: 303383-305382 Brassica rapa FPsc
Brara.D00050 2.0kb downstream 2.0kb downstream 5154 true A04: 305383-310536 Brassica rapa FPsc
Brara.D00050 2.0kb downstream 2.0kb downstream 2000 false A04: 308537-310536 Brassica rapa FPsc
Brara.D00050 5.0kb upstream 5.0kb upstream 8154 true A04: 300383-308536 Brassica rapa FPsc
Brara.D00050 5.0kb upstream 5.0kb upstream 5000 false A04: 300383-305382 Brassica rapa FPsc
Brara.D00050 5.0kb downstream 5.0kb downstream 8154 true A04: 305383-313536 Brassica rapa FPsc
Brara.D00050 5.0kb downstream 5.0kb downstream 5000 false A04: 308537-313536 Brassica rapa FPsc
Brara.D00050 10.0kb upstream 10.0kb upstream 13154 true A04: 295383-308536 Brassica rapa FPsc
Brara.D00050 10.0kb upstream 10.0kb upstream 10000 false A04: 295383-305382 Brassica rapa FPsc
Brara.D00050 10.0kb downstream 10.0kb downstream 13154 true A04: 305383-318536 Brassica rapa FPsc
Brara.D00050 10.0kb downstream 10.0kb downstream 10000 false A04: 308537-318536 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381404 5261 Brassicaceae View MSA
123828649 5264 Brassicales-Malvales View MSA
124341266 5266 SBM View MSA
124252573 5268 Malvidae View MSA
124073992 5270 Rosid View MSA
123737688 5271 Pentapetalae View MSA
122790708 5272 Eudicot View MSA
122042600 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier