Gene : Brara.C04655 B. rapa FPsc v1.3
Defline:  (1 of 3) 6.3.2.2 - Glutamate--cysteine ligase / Gamma-glutamylcysteine synthetase Genomic Order:  4655
Name:  ? Brara.C04655 Secondary Identifier:  ? PAC:30618078
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUTATHIONESYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04655 0.5kb upstream 0.5kb upstream 4029 true A03: 24862921-24866949 Brassica rapa FPsc
Brara.C04655 0.5kb upstream 0.5kb upstream 500 false A03: 24866450-24866949 Brassica rapa FPsc
Brara.C04655 0.5kb downstream 0.5kb downstream 4029 true A03: 24862421-24866449 Brassica rapa FPsc
Brara.C04655 0.5kb downstream 0.5kb downstream 500 false A03: 24862421-24862920 Brassica rapa FPsc
Brara.C04655 1.0kb upstream 1.0kb upstream 4529 true A03: 24862921-24867449 Brassica rapa FPsc
Brara.C04655 1.0kb upstream 1.0kb upstream 1000 false A03: 24866450-24867449 Brassica rapa FPsc
Brara.C04655 1.0kb downstream 1.0kb downstream 4529 true A03: 24861921-24866449 Brassica rapa FPsc
Brara.C04655 1.0kb downstream 1.0kb downstream 1000 false A03: 24861921-24862920 Brassica rapa FPsc
Brara.C04655 2.0kb upstream 2.0kb upstream 5529 true A03: 24862921-24868449 Brassica rapa FPsc
Brara.C04655 2.0kb upstream 2.0kb upstream 2000 false A03: 24866450-24868449 Brassica rapa FPsc
Brara.C04655 2.0kb downstream 2.0kb downstream 5529 true A03: 24860921-24866449 Brassica rapa FPsc
Brara.C04655 2.0kb downstream 2.0kb downstream 2000 false A03: 24860921-24862920 Brassica rapa FPsc
Brara.C04655 5.0kb upstream 5.0kb upstream 8529 true A03: 24862921-24871449 Brassica rapa FPsc
Brara.C04655 5.0kb upstream 5.0kb upstream 5000 false A03: 24866450-24871449 Brassica rapa FPsc
Brara.C04655 5.0kb downstream 5.0kb downstream 8529 true A03: 24857921-24866449 Brassica rapa FPsc
Brara.C04655 5.0kb downstream 5.0kb downstream 5000 false A03: 24857921-24862920 Brassica rapa FPsc
Brara.C04655 10.0kb upstream 10.0kb upstream 13529 true A03: 24862921-24876449 Brassica rapa FPsc
Brara.C04655 10.0kb upstream 10.0kb upstream 10000 false A03: 24866450-24876449 Brassica rapa FPsc
Brara.C04655 10.0kb downstream 10.0kb downstream 13529 true A03: 24852921-24866449 Brassica rapa FPsc
Brara.C04655 10.0kb downstream 10.0kb downstream 10000 false A03: 24852921-24862920 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347684 5261 Brassicaceae Singleton cluster - no MSA
123839403 5264 Brassicales-Malvales View MSA
124343642 5266 SBM View MSA
124247556 5268 Malvidae View MSA
124066026 5270 Rosid View MSA
123737554 5271 Pentapetalae View MSA
122790790 5272 Eudicot View MSA
122044028 5273 Angiosperm View MSA
121346589 5274 Embryophyte View MSA
123424300 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier