Gene : Brara.F00642 B. rapa FPsc v1.3
Defline:  (1 of 2) 6.3.4.13 - Phosphoribosylamine--glycine ligase / Phosphoribosylglycinamide synthetase Genomic Order:  642
Name:  ? Brara.F00642 Secondary Identifier:  ? PAC:30631898
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-841 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00642 0.5kb upstream 0.5kb upstream 2954 true A06: 3673706-3676659 Brassica rapa FPsc
Brara.F00642 0.5kb upstream 0.5kb upstream 500 false A06: 3676160-3676659 Brassica rapa FPsc
Brara.F00642 0.5kb downstream 0.5kb downstream 2954 true A06: 3673206-3676159 Brassica rapa FPsc
Brara.F00642 0.5kb downstream 0.5kb downstream 500 false A06: 3673206-3673705 Brassica rapa FPsc
Brara.F00642 1.0kb upstream 1.0kb upstream 3454 true A06: 3673706-3677159 Brassica rapa FPsc
Brara.F00642 1.0kb upstream 1.0kb upstream 1000 false A06: 3676160-3677159 Brassica rapa FPsc
Brara.F00642 1.0kb downstream 1.0kb downstream 3454 true A06: 3672706-3676159 Brassica rapa FPsc
Brara.F00642 1.0kb downstream 1.0kb downstream 1000 false A06: 3672706-3673705 Brassica rapa FPsc
Brara.F00642 2.0kb upstream 2.0kb upstream 4454 true A06: 3673706-3678159 Brassica rapa FPsc
Brara.F00642 2.0kb upstream 2.0kb upstream 2000 false A06: 3676160-3678159 Brassica rapa FPsc
Brara.F00642 2.0kb downstream 2.0kb downstream 4454 true A06: 3671706-3676159 Brassica rapa FPsc
Brara.F00642 2.0kb downstream 2.0kb downstream 2000 false A06: 3671706-3673705 Brassica rapa FPsc
Brara.F00642 5.0kb upstream 5.0kb upstream 7454 true A06: 3673706-3681159 Brassica rapa FPsc
Brara.F00642 5.0kb upstream 5.0kb upstream 5000 false A06: 3676160-3681159 Brassica rapa FPsc
Brara.F00642 5.0kb downstream 5.0kb downstream 7454 true A06: 3668706-3676159 Brassica rapa FPsc
Brara.F00642 5.0kb downstream 5.0kb downstream 5000 false A06: 3668706-3673705 Brassica rapa FPsc
Brara.F00642 10.0kb upstream 10.0kb upstream 12454 true A06: 3673706-3686159 Brassica rapa FPsc
Brara.F00642 10.0kb upstream 10.0kb upstream 10000 false A06: 3676160-3686159 Brassica rapa FPsc
Brara.F00642 10.0kb downstream 10.0kb downstream 12454 true A06: 3663706-3676159 Brassica rapa FPsc
Brara.F00642 10.0kb downstream 10.0kb downstream 10000 false A06: 3663706-3673705 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368380 5261 Brassicaceae View MSA
123831561 5264 Brassicales-Malvales View MSA
124337590 5266 SBM View MSA
124240737 5268 Malvidae View MSA
124061886 5270 Rosid View MSA
123741670 5271 Pentapetalae View MSA
122788361 5272 Eudicot View MSA
122046368 5273 Angiosperm View MSA
121345557 5274 Embryophyte View MSA
123424132 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier