Gene : Brara.F00539 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10799:SF350 - TRANSCRIPTIONAL REGULATOR ATRX HOMOLOG Genomic Order:  539
Name:  ? Brara.F00539 Secondary Identifier:  ? PAC:30630157
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00539 0.5kb upstream 0.5kb upstream 10007 true A06: 3204383-3214389 Brassica rapa FPsc
Brara.F00539 0.5kb upstream 0.5kb upstream 500 false A06: 3204383-3204882 Brassica rapa FPsc
Brara.F00539 0.5kb downstream 0.5kb downstream 10007 true A06: 3204883-3214889 Brassica rapa FPsc
Brara.F00539 0.5kb downstream 0.5kb downstream 500 false A06: 3214390-3214889 Brassica rapa FPsc
Brara.F00539 1.0kb upstream 1.0kb upstream 10507 true A06: 3203883-3214389 Brassica rapa FPsc
Brara.F00539 1.0kb upstream 1.0kb upstream 1000 false A06: 3203883-3204882 Brassica rapa FPsc
Brara.F00539 1.0kb downstream 1.0kb downstream 10507 true A06: 3204883-3215389 Brassica rapa FPsc
Brara.F00539 1.0kb downstream 1.0kb downstream 1000 false A06: 3214390-3215389 Brassica rapa FPsc
Brara.F00539 2.0kb upstream 2.0kb upstream 11507 true A06: 3202883-3214389 Brassica rapa FPsc
Brara.F00539 2.0kb upstream 2.0kb upstream 2000 false A06: 3202883-3204882 Brassica rapa FPsc
Brara.F00539 2.0kb downstream 2.0kb downstream 11507 true A06: 3204883-3216389 Brassica rapa FPsc
Brara.F00539 2.0kb downstream 2.0kb downstream 2000 false A06: 3214390-3216389 Brassica rapa FPsc
Brara.F00539 5.0kb upstream 5.0kb upstream 14507 true A06: 3199883-3214389 Brassica rapa FPsc
Brara.F00539 5.0kb upstream 5.0kb upstream 5000 false A06: 3199883-3204882 Brassica rapa FPsc
Brara.F00539 5.0kb downstream 5.0kb downstream 14507 true A06: 3204883-3219389 Brassica rapa FPsc
Brara.F00539 5.0kb downstream 5.0kb downstream 5000 false A06: 3214390-3219389 Brassica rapa FPsc
Brara.F00539 10.0kb upstream 10.0kb upstream 19507 true A06: 3194883-3214389 Brassica rapa FPsc
Brara.F00539 10.0kb upstream 10.0kb upstream 10000 false A06: 3194883-3204882 Brassica rapa FPsc
Brara.F00539 10.0kb downstream 10.0kb downstream 19507 true A06: 3204883-3224389 Brassica rapa FPsc
Brara.F00539 10.0kb downstream 10.0kb downstream 10000 false A06: 3214390-3224389 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373021 5261 Brassicaceae View MSA
123830926 5264 Brassicales-Malvales View MSA
124343842 5266 SBM View MSA
124240013 5268 Malvidae View MSA
124061145 5270 Rosid View MSA
123747129 5271 Pentapetalae View MSA
122792246 5272 Eudicot View MSA
122043506 5273 Angiosperm View MSA
121348350 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier