Gene : Brara.F00542 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR33372:SF1 - CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  542
Name:  ? Brara.F00542 Secondary Identifier:  ? PAC:30629894
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00542 0.5kb upstream 0.5kb upstream 3048 true A06: 3229955-3233002 Brassica rapa FPsc
Brara.F00542 0.5kb upstream 0.5kb upstream 500 false A06: 3232503-3233002 Brassica rapa FPsc
Brara.F00542 0.5kb downstream 0.5kb downstream 3048 true A06: 3229455-3232502 Brassica rapa FPsc
Brara.F00542 0.5kb downstream 0.5kb downstream 500 false A06: 3229455-3229954 Brassica rapa FPsc
Brara.F00542 1.0kb upstream 1.0kb upstream 3548 true A06: 3229955-3233502 Brassica rapa FPsc
Brara.F00542 1.0kb upstream 1.0kb upstream 1000 false A06: 3232503-3233502 Brassica rapa FPsc
Brara.F00542 1.0kb downstream 1.0kb downstream 3548 true A06: 3228955-3232502 Brassica rapa FPsc
Brara.F00542 1.0kb downstream 1.0kb downstream 1000 false A06: 3228955-3229954 Brassica rapa FPsc
Brara.F00542 2.0kb upstream 2.0kb upstream 4548 true A06: 3229955-3234502 Brassica rapa FPsc
Brara.F00542 2.0kb upstream 2.0kb upstream 2000 false A06: 3232503-3234502 Brassica rapa FPsc
Brara.F00542 2.0kb downstream 2.0kb downstream 4548 true A06: 3227955-3232502 Brassica rapa FPsc
Brara.F00542 2.0kb downstream 2.0kb downstream 2000 false A06: 3227955-3229954 Brassica rapa FPsc
Brara.F00542 5.0kb upstream 5.0kb upstream 7548 true A06: 3229955-3237502 Brassica rapa FPsc
Brara.F00542 5.0kb upstream 5.0kb upstream 5000 false A06: 3232503-3237502 Brassica rapa FPsc
Brara.F00542 5.0kb downstream 5.0kb downstream 7548 true A06: 3224955-3232502 Brassica rapa FPsc
Brara.F00542 5.0kb downstream 5.0kb downstream 5000 false A06: 3224955-3229954 Brassica rapa FPsc
Brara.F00542 10.0kb upstream 10.0kb upstream 12548 true A06: 3229955-3242502 Brassica rapa FPsc
Brara.F00542 10.0kb upstream 10.0kb upstream 10000 false A06: 3232503-3242502 Brassica rapa FPsc
Brara.F00542 10.0kb downstream 10.0kb downstream 12548 true A06: 3219955-3232502 Brassica rapa FPsc
Brara.F00542 10.0kb downstream 10.0kb downstream 10000 false A06: 3219955-3229954 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364278 5261 Brassicaceae View MSA
123831162 5264 Brassicales-Malvales View MSA
124345315 5266 SBM View MSA
124244811 5268 Malvidae View MSA
124063539 5270 Rosid View MSA
123738014 5271 Pentapetalae View MSA
122791822 5272 Eudicot View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier