Gene : Brara.C04492 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR10343:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 Genomic Order:  4492
Name:  ? Brara.C04492 Secondary Identifier:  ? PAC:30618147
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04492 0.5kb upstream 0.5kb upstream 2197 true A03: 23694532-23696728 Brassica rapa FPsc
Brara.C04492 0.5kb upstream 0.5kb upstream 500 false A03: 23694532-23695031 Brassica rapa FPsc
Brara.C04492 0.5kb downstream 0.5kb downstream 2197 true A03: 23695032-23697228 Brassica rapa FPsc
Brara.C04492 0.5kb downstream 0.5kb downstream 500 false A03: 23696729-23697228 Brassica rapa FPsc
Brara.C04492 1.0kb upstream 1.0kb upstream 2697 true A03: 23694032-23696728 Brassica rapa FPsc
Brara.C04492 1.0kb upstream 1.0kb upstream 1000 false A03: 23694032-23695031 Brassica rapa FPsc
Brara.C04492 1.0kb downstream 1.0kb downstream 2697 true A03: 23695032-23697728 Brassica rapa FPsc
Brara.C04492 1.0kb downstream 1.0kb downstream 1000 false A03: 23696729-23697728 Brassica rapa FPsc
Brara.C04492 2.0kb upstream 2.0kb upstream 3697 true A03: 23693032-23696728 Brassica rapa FPsc
Brara.C04492 2.0kb upstream 2.0kb upstream 2000 false A03: 23693032-23695031 Brassica rapa FPsc
Brara.C04492 2.0kb downstream 2.0kb downstream 3697 true A03: 23695032-23698728 Brassica rapa FPsc
Brara.C04492 2.0kb downstream 2.0kb downstream 2000 false A03: 23696729-23698728 Brassica rapa FPsc
Brara.C04492 5.0kb upstream 5.0kb upstream 6697 true A03: 23690032-23696728 Brassica rapa FPsc
Brara.C04492 5.0kb upstream 5.0kb upstream 5000 false A03: 23690032-23695031 Brassica rapa FPsc
Brara.C04492 5.0kb downstream 5.0kb downstream 6697 true A03: 23695032-23701728 Brassica rapa FPsc
Brara.C04492 5.0kb downstream 5.0kb downstream 5000 false A03: 23696729-23701728 Brassica rapa FPsc
Brara.C04492 10.0kb upstream 10.0kb upstream 11697 true A03: 23685032-23696728 Brassica rapa FPsc
Brara.C04492 10.0kb upstream 10.0kb upstream 10000 false A03: 23685032-23695031 Brassica rapa FPsc
Brara.C04492 10.0kb downstream 10.0kb downstream 11697 true A03: 23695032-23706728 Brassica rapa FPsc
Brara.C04492 10.0kb downstream 10.0kb downstream 10000 false A03: 23696729-23706728 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347703 5261 Brassicaceae Singleton cluster - no MSA
123787177 5264 Brassicales-Malvales Singleton cluster - no MSA
124285263 5266 SBM Singleton cluster - no MSA
124139326 5268 Malvidae Singleton cluster - no MSA
124041827 5270 Rosid View MSA
123740870 5271 Pentapetalae View MSA
122792277 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier