Gene : Brara.C04545 B. rapa FPsc v1.3
Defline:  (1 of 13) PF05703 - Auxin canalisation (Auxin_canalis) Genomic Order:  4545
Name:  ? Brara.C04545 Secondary Identifier:  ? PAC:30615924
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04545 0.5kb upstream 0.5kb upstream 2529 true A03: 23994440-23996968 Brassica rapa FPsc
Brara.C04545 0.5kb upstream 0.5kb upstream 500 false A03: 23994440-23994939 Brassica rapa FPsc
Brara.C04545 0.5kb downstream 0.5kb downstream 2529 true A03: 23994940-23997468 Brassica rapa FPsc
Brara.C04545 0.5kb downstream 0.5kb downstream 500 false A03: 23996969-23997468 Brassica rapa FPsc
Brara.C04545 1.0kb upstream 1.0kb upstream 3029 true A03: 23993940-23996968 Brassica rapa FPsc
Brara.C04545 1.0kb upstream 1.0kb upstream 1000 false A03: 23993940-23994939 Brassica rapa FPsc
Brara.C04545 1.0kb downstream 1.0kb downstream 3029 true A03: 23994940-23997968 Brassica rapa FPsc
Brara.C04545 1.0kb downstream 1.0kb downstream 1000 false A03: 23996969-23997968 Brassica rapa FPsc
Brara.C04545 2.0kb upstream 2.0kb upstream 4029 true A03: 23992940-23996968 Brassica rapa FPsc
Brara.C04545 2.0kb upstream 2.0kb upstream 2000 false A03: 23992940-23994939 Brassica rapa FPsc
Brara.C04545 2.0kb downstream 2.0kb downstream 4029 true A03: 23994940-23998968 Brassica rapa FPsc
Brara.C04545 2.0kb downstream 2.0kb downstream 2000 false A03: 23996969-23998968 Brassica rapa FPsc
Brara.C04545 5.0kb upstream 5.0kb upstream 7029 true A03: 23989940-23996968 Brassica rapa FPsc
Brara.C04545 5.0kb upstream 5.0kb upstream 5000 false A03: 23989940-23994939 Brassica rapa FPsc
Brara.C04545 5.0kb downstream 5.0kb downstream 7029 true A03: 23994940-24001968 Brassica rapa FPsc
Brara.C04545 5.0kb downstream 5.0kb downstream 5000 false A03: 23996969-24001968 Brassica rapa FPsc
Brara.C04545 10.0kb upstream 10.0kb upstream 12029 true A03: 23984940-23996968 Brassica rapa FPsc
Brara.C04545 10.0kb upstream 10.0kb upstream 10000 false A03: 23984940-23994939 Brassica rapa FPsc
Brara.C04545 10.0kb downstream 10.0kb downstream 12029 true A03: 23994940-24006968 Brassica rapa FPsc
Brara.C04545 10.0kb downstream 10.0kb downstream 10000 false A03: 23996969-24006968 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347064 5261 Brassicaceae Singleton cluster - no MSA
123786653 5264 Brassicales-Malvales Singleton cluster - no MSA
124284754 5266 SBM Singleton cluster - no MSA
124250887 5268 Malvidae View MSA
124050253 5270 Rosid View MSA
123741992 5271 Pentapetalae View MSA
122794510 5272 Eudicot View MSA
122048590 5273 Angiosperm View MSA
121311030 5274 Embryophyte View MSA
123348384 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier