Gene : Brara.C04543 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.1.1.27 - L-lactate dehydrogenase / L-lactic dehydrogenase Genomic Order:  4543
Name:  ? Brara.C04543 Secondary Identifier:  ? PAC:30617558
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ANAEROFRUCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5481 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04543 0.5kb upstream 0.5kb upstream 1806 true A03: 23988090-23989895 Brassica rapa FPsc
Brara.C04543 0.5kb upstream 0.5kb upstream 500 false A03: 23988090-23988589 Brassica rapa FPsc
Brara.C04543 0.5kb downstream 0.5kb downstream 1806 true A03: 23988590-23990395 Brassica rapa FPsc
Brara.C04543 0.5kb downstream 0.5kb downstream 500 false A03: 23989896-23990395 Brassica rapa FPsc
Brara.C04543 1.0kb upstream 1.0kb upstream 2306 true A03: 23987590-23989895 Brassica rapa FPsc
Brara.C04543 1.0kb upstream 1.0kb upstream 1000 false A03: 23987590-23988589 Brassica rapa FPsc
Brara.C04543 1.0kb downstream 1.0kb downstream 2306 true A03: 23988590-23990895 Brassica rapa FPsc
Brara.C04543 1.0kb downstream 1.0kb downstream 1000 false A03: 23989896-23990895 Brassica rapa FPsc
Brara.C04543 2.0kb upstream 2.0kb upstream 3306 true A03: 23986590-23989895 Brassica rapa FPsc
Brara.C04543 2.0kb upstream 2.0kb upstream 2000 false A03: 23986590-23988589 Brassica rapa FPsc
Brara.C04543 2.0kb downstream 2.0kb downstream 3306 true A03: 23988590-23991895 Brassica rapa FPsc
Brara.C04543 2.0kb downstream 2.0kb downstream 2000 false A03: 23989896-23991895 Brassica rapa FPsc
Brara.C04543 5.0kb upstream 5.0kb upstream 6306 true A03: 23983590-23989895 Brassica rapa FPsc
Brara.C04543 5.0kb upstream 5.0kb upstream 5000 false A03: 23983590-23988589 Brassica rapa FPsc
Brara.C04543 5.0kb downstream 5.0kb downstream 6306 true A03: 23988590-23994895 Brassica rapa FPsc
Brara.C04543 5.0kb downstream 5.0kb downstream 5000 false A03: 23989896-23994895 Brassica rapa FPsc
Brara.C04543 10.0kb upstream 10.0kb upstream 11306 true A03: 23978590-23989895 Brassica rapa FPsc
Brara.C04543 10.0kb upstream 10.0kb upstream 10000 false A03: 23978590-23988589 Brassica rapa FPsc
Brara.C04543 10.0kb downstream 10.0kb downstream 11306 true A03: 23988590-23999895 Brassica rapa FPsc
Brara.C04543 10.0kb downstream 10.0kb downstream 10000 false A03: 23989896-23999895 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380281 5261 Brassicaceae View MSA
123834652 5264 Brassicales-Malvales View MSA
124340660 5266 SBM View MSA
124253081 5268 Malvidae View MSA
124064441 5270 Rosid View MSA
123739146 5271 Pentapetalae View MSA
122785845 5272 Eudicot View MSA
122045770 5273 Angiosperm View MSA
121350532 5274 Embryophyte View MSA
123381776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier