Gene : Brara.C04550 B. rapa FPsc v1.3

Defline:  (1 of 20) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  4550
Name:  ? Brara.C04550 Secondary Identifier:  ? PAC:30616491

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04550 0.5kb upstream 0.5kb upstream 2034 true A03: 24008674-24010707 Brassica rapa FPsc
Brara.C04550 0.5kb upstream 0.5kb upstream 500 false A03: 24008674-24009173 Brassica rapa FPsc
Brara.C04550 0.5kb downstream 0.5kb downstream 2034 true A03: 24009174-24011207 Brassica rapa FPsc
Brara.C04550 0.5kb downstream 0.5kb downstream 500 false A03: 24010708-24011207 Brassica rapa FPsc
Brara.C04550 1.0kb upstream 1.0kb upstream 2534 true A03: 24008174-24010707 Brassica rapa FPsc
Brara.C04550 1.0kb upstream 1.0kb upstream 1000 false A03: 24008174-24009173 Brassica rapa FPsc
Brara.C04550 1.0kb downstream 1.0kb downstream 2534 true A03: 24009174-24011707 Brassica rapa FPsc
Brara.C04550 1.0kb downstream 1.0kb downstream 1000 false A03: 24010708-24011707 Brassica rapa FPsc
Brara.C04550 2.0kb upstream 2.0kb upstream 3534 true A03: 24007174-24010707 Brassica rapa FPsc
Brara.C04550 2.0kb upstream 2.0kb upstream 2000 false A03: 24007174-24009173 Brassica rapa FPsc
Brara.C04550 2.0kb downstream 2.0kb downstream 3534 true A03: 24009174-24012707 Brassica rapa FPsc
Brara.C04550 2.0kb downstream 2.0kb downstream 2000 false A03: 24010708-24012707 Brassica rapa FPsc
Brara.C04550 5.0kb upstream 5.0kb upstream 6534 true A03: 24004174-24010707 Brassica rapa FPsc
Brara.C04550 5.0kb upstream 5.0kb upstream 5000 false A03: 24004174-24009173 Brassica rapa FPsc
Brara.C04550 5.0kb downstream 5.0kb downstream 6534 true A03: 24009174-24015707 Brassica rapa FPsc
Brara.C04550 5.0kb downstream 5.0kb downstream 5000 false A03: 24010708-24015707 Brassica rapa FPsc
Brara.C04550 10.0kb upstream 10.0kb upstream 11534 true A03: 23999174-24010707 Brassica rapa FPsc
Brara.C04550 10.0kb upstream 10.0kb upstream 10000 false A03: 23999174-24009173 Brassica rapa FPsc
Brara.C04550 10.0kb downstream 10.0kb downstream 11534 true A03: 24009174-24020707 Brassica rapa FPsc
Brara.C04550 10.0kb downstream 10.0kb downstream 10000 false A03: 24010708-24020707 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362881 5261 Brassicaceae View MSA
123829917 5264 Brassicales-Malvales View MSA
124349371 5266 SBM View MSA
124253644 5268 Malvidae View MSA
124073267 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier