Gene : Brara.F00584 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR32266:SF12 - NICOTIANAMINE SYNTHASE-RELATED Genomic Order:  584
Name:  ? Brara.F00584 Secondary Identifier:  ? PAC:30630524
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5957 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00584 0.5kb upstream 0.5kb upstream 1705 true A06: 3438412-3440116 Brassica rapa FPsc
Brara.F00584 0.5kb upstream 0.5kb upstream 500 false A06: 3438412-3438911 Brassica rapa FPsc
Brara.F00584 0.5kb downstream 0.5kb downstream 1705 true A06: 3438912-3440616 Brassica rapa FPsc
Brara.F00584 0.5kb downstream 0.5kb downstream 500 false A06: 3440117-3440616 Brassica rapa FPsc
Brara.F00584 1.0kb upstream 1.0kb upstream 2205 true A06: 3437912-3440116 Brassica rapa FPsc
Brara.F00584 1.0kb upstream 1.0kb upstream 1000 false A06: 3437912-3438911 Brassica rapa FPsc
Brara.F00584 1.0kb downstream 1.0kb downstream 2205 true A06: 3438912-3441116 Brassica rapa FPsc
Brara.F00584 1.0kb downstream 1.0kb downstream 1000 false A06: 3440117-3441116 Brassica rapa FPsc
Brara.F00584 2.0kb upstream 2.0kb upstream 3205 true A06: 3436912-3440116 Brassica rapa FPsc
Brara.F00584 2.0kb upstream 2.0kb upstream 2000 false A06: 3436912-3438911 Brassica rapa FPsc
Brara.F00584 2.0kb downstream 2.0kb downstream 3205 true A06: 3438912-3442116 Brassica rapa FPsc
Brara.F00584 2.0kb downstream 2.0kb downstream 2000 false A06: 3440117-3442116 Brassica rapa FPsc
Brara.F00584 5.0kb upstream 5.0kb upstream 6205 true A06: 3433912-3440116 Brassica rapa FPsc
Brara.F00584 5.0kb upstream 5.0kb upstream 5000 false A06: 3433912-3438911 Brassica rapa FPsc
Brara.F00584 5.0kb downstream 5.0kb downstream 6205 true A06: 3438912-3445116 Brassica rapa FPsc
Brara.F00584 5.0kb downstream 5.0kb downstream 5000 false A06: 3440117-3445116 Brassica rapa FPsc
Brara.F00584 10.0kb upstream 10.0kb upstream 11205 true A06: 3428912-3440116 Brassica rapa FPsc
Brara.F00584 10.0kb upstream 10.0kb upstream 10000 false A06: 3428912-3438911 Brassica rapa FPsc
Brara.F00584 10.0kb downstream 10.0kb downstream 11205 true A06: 3438912-3450116 Brassica rapa FPsc
Brara.F00584 10.0kb downstream 10.0kb downstream 10000 false A06: 3440117-3450116 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367784 5261 Brassicaceae View MSA
123830815 5264 Brassicales-Malvales View MSA
124346963 5266 SBM View MSA
124238052 5268 Malvidae View MSA
124066045 5270 Rosid View MSA
123750791 5271 Pentapetalae View MSA
122792107 5272 Eudicot View MSA
122044478 5273 Angiosperm View MSA
121350055 5274 Embryophyte View MSA
123381558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier