Gene : Brara.F00483 B. rapa FPsc v1.3
Defline:  (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase Genomic Order:  483
Name:  ? Brara.F00483 Secondary Identifier:  ? PAC:30628199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00483 0.5kb upstream 0.5kb upstream 8896 true A06: 2950315-2959210 Brassica rapa FPsc
Brara.F00483 0.5kb upstream 0.5kb upstream 500 false A06: 2950315-2950814 Brassica rapa FPsc
Brara.F00483 0.5kb downstream 0.5kb downstream 8896 true A06: 2950815-2959710 Brassica rapa FPsc
Brara.F00483 0.5kb downstream 0.5kb downstream 500 false A06: 2959211-2959710 Brassica rapa FPsc
Brara.F00483 1.0kb upstream 1.0kb upstream 9396 true A06: 2949815-2959210 Brassica rapa FPsc
Brara.F00483 1.0kb upstream 1.0kb upstream 1000 false A06: 2949815-2950814 Brassica rapa FPsc
Brara.F00483 1.0kb downstream 1.0kb downstream 9396 true A06: 2950815-2960210 Brassica rapa FPsc
Brara.F00483 1.0kb downstream 1.0kb downstream 1000 false A06: 2959211-2960210 Brassica rapa FPsc
Brara.F00483 2.0kb upstream 2.0kb upstream 10396 true A06: 2948815-2959210 Brassica rapa FPsc
Brara.F00483 2.0kb upstream 2.0kb upstream 2000 false A06: 2948815-2950814 Brassica rapa FPsc
Brara.F00483 2.0kb downstream 2.0kb downstream 10396 true A06: 2950815-2961210 Brassica rapa FPsc
Brara.F00483 2.0kb downstream 2.0kb downstream 2000 false A06: 2959211-2961210 Brassica rapa FPsc
Brara.F00483 5.0kb upstream 5.0kb upstream 13396 true A06: 2945815-2959210 Brassica rapa FPsc
Brara.F00483 5.0kb upstream 5.0kb upstream 5000 false A06: 2945815-2950814 Brassica rapa FPsc
Brara.F00483 5.0kb downstream 5.0kb downstream 13396 true A06: 2950815-2964210 Brassica rapa FPsc
Brara.F00483 5.0kb downstream 5.0kb downstream 5000 false A06: 2959211-2964210 Brassica rapa FPsc
Brara.F00483 10.0kb upstream 10.0kb upstream 18396 true A06: 2940815-2959210 Brassica rapa FPsc
Brara.F00483 10.0kb upstream 10.0kb upstream 10000 false A06: 2940815-2950814 Brassica rapa FPsc
Brara.F00483 10.0kb downstream 10.0kb downstream 18396 true A06: 2950815-2969210 Brassica rapa FPsc
Brara.F00483 10.0kb downstream 10.0kb downstream 10000 false A06: 2959211-2969210 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121505457 5273 Angiosperm Singleton cluster - no MSA
122350226 5261 Brassicaceae Singleton cluster - no MSA
123789292 5264 Brassicales-Malvales Singleton cluster - no MSA
124287295 5266 SBM Singleton cluster - no MSA
124140996 5268 Malvidae Singleton cluster - no MSA
123868124 5270 Rosid Singleton cluster - no MSA
123452877 5271 Pentapetalae Singleton cluster - no MSA
122488356 5272 Eudicot Singleton cluster - no MSA
120778666 5274 Embryophyte Singleton cluster - no MSA
123428083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier