Gene : Brara.F00499 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR18952:SF111 - ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  499
Name:  ? Brara.F00499 Secondary Identifier:  ? PAC:30631791
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CYANCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-241 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  
BrapaFPsc PWYQT-4429 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00499 0.5kb upstream 0.5kb upstream 2347 true A06: 3026530-3028876 Brassica rapa FPsc
Brara.F00499 0.5kb upstream 0.5kb upstream 500 false A06: 3028377-3028876 Brassica rapa FPsc
Brara.F00499 0.5kb downstream 0.5kb downstream 2347 true A06: 3026030-3028376 Brassica rapa FPsc
Brara.F00499 0.5kb downstream 0.5kb downstream 500 false A06: 3026030-3026529 Brassica rapa FPsc
Brara.F00499 1.0kb upstream 1.0kb upstream 2847 true A06: 3026530-3029376 Brassica rapa FPsc
Brara.F00499 1.0kb upstream 1.0kb upstream 1000 false A06: 3028377-3029376 Brassica rapa FPsc
Brara.F00499 1.0kb downstream 1.0kb downstream 2847 true A06: 3025530-3028376 Brassica rapa FPsc
Brara.F00499 1.0kb downstream 1.0kb downstream 1000 false A06: 3025530-3026529 Brassica rapa FPsc
Brara.F00499 2.0kb upstream 2.0kb upstream 3847 true A06: 3026530-3030376 Brassica rapa FPsc
Brara.F00499 2.0kb upstream 2.0kb upstream 2000 false A06: 3028377-3030376 Brassica rapa FPsc
Brara.F00499 2.0kb downstream 2.0kb downstream 3847 true A06: 3024530-3028376 Brassica rapa FPsc
Brara.F00499 2.0kb downstream 2.0kb downstream 2000 false A06: 3024530-3026529 Brassica rapa FPsc
Brara.F00499 5.0kb upstream 5.0kb upstream 6847 true A06: 3026530-3033376 Brassica rapa FPsc
Brara.F00499 5.0kb upstream 5.0kb upstream 5000 false A06: 3028377-3033376 Brassica rapa FPsc
Brara.F00499 5.0kb downstream 5.0kb downstream 6847 true A06: 3021530-3028376 Brassica rapa FPsc
Brara.F00499 5.0kb downstream 5.0kb downstream 5000 false A06: 3021530-3026529 Brassica rapa FPsc
Brara.F00499 10.0kb upstream 10.0kb upstream 11847 true A06: 3026530-3038376 Brassica rapa FPsc
Brara.F00499 10.0kb upstream 10.0kb upstream 10000 false A06: 3028377-3038376 Brassica rapa FPsc
Brara.F00499 10.0kb downstream 10.0kb downstream 11847 true A06: 3016530-3028376 Brassica rapa FPsc
Brara.F00499 10.0kb downstream 10.0kb downstream 10000 false A06: 3016530-3026529 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374957 5261 Brassicaceae View MSA
123838880 5264 Brassicales-Malvales View MSA
124350350 5266 SBM View MSA
124244340 5268 Malvidae View MSA
124071031 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier