Gene : Brara.C04424 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10811//PTHR10811:SF25 - FRINGE-RELATED Genomic Order:  4424
Name:  ? Brara.C04424 Secondary Identifier:  ? PAC:30618221
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04424 0.5kb upstream 0.5kb upstream 3865 true A03: 23317743-23321607 Brassica rapa FPsc
Brara.C04424 0.5kb upstream 0.5kb upstream 500 false A03: 23321108-23321607 Brassica rapa FPsc
Brara.C04424 0.5kb downstream 0.5kb downstream 3865 true A03: 23317243-23321107 Brassica rapa FPsc
Brara.C04424 0.5kb downstream 0.5kb downstream 500 false A03: 23317243-23317742 Brassica rapa FPsc
Brara.C04424 1.0kb upstream 1.0kb upstream 4365 true A03: 23317743-23322107 Brassica rapa FPsc
Brara.C04424 1.0kb upstream 1.0kb upstream 1000 false A03: 23321108-23322107 Brassica rapa FPsc
Brara.C04424 1.0kb downstream 1.0kb downstream 4365 true A03: 23316743-23321107 Brassica rapa FPsc
Brara.C04424 1.0kb downstream 1.0kb downstream 1000 false A03: 23316743-23317742 Brassica rapa FPsc
Brara.C04424 2.0kb upstream 2.0kb upstream 5365 true A03: 23317743-23323107 Brassica rapa FPsc
Brara.C04424 2.0kb upstream 2.0kb upstream 2000 false A03: 23321108-23323107 Brassica rapa FPsc
Brara.C04424 2.0kb downstream 2.0kb downstream 5365 true A03: 23315743-23321107 Brassica rapa FPsc
Brara.C04424 2.0kb downstream 2.0kb downstream 2000 false A03: 23315743-23317742 Brassica rapa FPsc
Brara.C04424 5.0kb upstream 5.0kb upstream 8365 true A03: 23317743-23326107 Brassica rapa FPsc
Brara.C04424 5.0kb upstream 5.0kb upstream 5000 false A03: 23321108-23326107 Brassica rapa FPsc
Brara.C04424 5.0kb downstream 5.0kb downstream 8365 true A03: 23312743-23321107 Brassica rapa FPsc
Brara.C04424 5.0kb downstream 5.0kb downstream 5000 false A03: 23312743-23317742 Brassica rapa FPsc
Brara.C04424 10.0kb upstream 10.0kb upstream 13365 true A03: 23317743-23331107 Brassica rapa FPsc
Brara.C04424 10.0kb upstream 10.0kb upstream 10000 false A03: 23321108-23331107 Brassica rapa FPsc
Brara.C04424 10.0kb downstream 10.0kb downstream 13365 true A03: 23307743-23321107 Brassica rapa FPsc
Brara.C04424 10.0kb downstream 10.0kb downstream 10000 false A03: 23307743-23317742 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347721 5261 Brassicaceae Singleton cluster - no MSA
123787193 5264 Brassicales-Malvales Singleton cluster - no MSA
124285278 5266 SBM Singleton cluster - no MSA
124139339 5268 Malvidae Singleton cluster - no MSA
124064758 5270 Rosid View MSA
123742167 5271 Pentapetalae View MSA
122792514 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier