Gene : Brara.C04449 B. rapa FPsc v1.3
Defline:  (1 of 11) PTHR10168:SF115 - MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  4449
Name:  ? Brara.C04449 Secondary Identifier:  ? PAC:30615287
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04449 0.5kb upstream 0.5kb upstream 1115 true A03: 23478694-23479808 Brassica rapa FPsc
Brara.C04449 0.5kb upstream 0.5kb upstream 500 false A03: 23478694-23479193 Brassica rapa FPsc
Brara.C04449 0.5kb downstream 0.5kb downstream 1115 true A03: 23479194-23480308 Brassica rapa FPsc
Brara.C04449 0.5kb downstream 0.5kb downstream 500 false A03: 23479809-23480308 Brassica rapa FPsc
Brara.C04449 1.0kb upstream 1.0kb upstream 1615 true A03: 23478194-23479808 Brassica rapa FPsc
Brara.C04449 1.0kb upstream 1.0kb upstream 1000 false A03: 23478194-23479193 Brassica rapa FPsc
Brara.C04449 1.0kb downstream 1.0kb downstream 1615 true A03: 23479194-23480808 Brassica rapa FPsc
Brara.C04449 1.0kb downstream 1.0kb downstream 1000 false A03: 23479809-23480808 Brassica rapa FPsc
Brara.C04449 2.0kb upstream 2.0kb upstream 2615 true A03: 23477194-23479808 Brassica rapa FPsc
Brara.C04449 2.0kb upstream 2.0kb upstream 2000 false A03: 23477194-23479193 Brassica rapa FPsc
Brara.C04449 2.0kb downstream 2.0kb downstream 2615 true A03: 23479194-23481808 Brassica rapa FPsc
Brara.C04449 2.0kb downstream 2.0kb downstream 2000 false A03: 23479809-23481808 Brassica rapa FPsc
Brara.C04449 5.0kb upstream 5.0kb upstream 5615 true A03: 23474194-23479808 Brassica rapa FPsc
Brara.C04449 5.0kb upstream 5.0kb upstream 5000 false A03: 23474194-23479193 Brassica rapa FPsc
Brara.C04449 5.0kb downstream 5.0kb downstream 5615 true A03: 23479194-23484808 Brassica rapa FPsc
Brara.C04449 5.0kb downstream 5.0kb downstream 5000 false A03: 23479809-23484808 Brassica rapa FPsc
Brara.C04449 10.0kb upstream 10.0kb upstream 10615 true A03: 23469194-23479808 Brassica rapa FPsc
Brara.C04449 10.0kb upstream 10.0kb upstream 10000 false A03: 23469194-23479193 Brassica rapa FPsc
Brara.C04449 10.0kb downstream 10.0kb downstream 10615 true A03: 23479194-23489808 Brassica rapa FPsc
Brara.C04449 10.0kb downstream 10.0kb downstream 10000 false A03: 23479809-23489808 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365730 5261 Brassicaceae View MSA
123836596 5264 Brassicales-Malvales View MSA
124340857 5266 SBM View MSA
124253911 5268 Malvidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier