Gene : Brara.F00532 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10338:SF126 - MAGNESIUM-CHELATASE SUBUNIT CHLD, CHLOROPLASTIC Genomic Order:  532
Name:  ? Brara.F00532 Secondary Identifier:  ? PAC:30630870
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CHLOROPHYLL-SYN Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00532 0.5kb upstream 0.5kb upstream 4463 true A06: 3183669-3188131 Brassica rapa FPsc
Brara.F00532 0.5kb upstream 0.5kb upstream 500 false A06: 3183669-3184168 Brassica rapa FPsc
Brara.F00532 0.5kb downstream 0.5kb downstream 4463 true A06: 3184169-3188631 Brassica rapa FPsc
Brara.F00532 0.5kb downstream 0.5kb downstream 500 false A06: 3188132-3188631 Brassica rapa FPsc
Brara.F00532 1.0kb upstream 1.0kb upstream 4963 true A06: 3183169-3188131 Brassica rapa FPsc
Brara.F00532 1.0kb upstream 1.0kb upstream 1000 false A06: 3183169-3184168 Brassica rapa FPsc
Brara.F00532 1.0kb downstream 1.0kb downstream 4963 true A06: 3184169-3189131 Brassica rapa FPsc
Brara.F00532 1.0kb downstream 1.0kb downstream 1000 false A06: 3188132-3189131 Brassica rapa FPsc
Brara.F00532 2.0kb upstream 2.0kb upstream 5963 true A06: 3182169-3188131 Brassica rapa FPsc
Brara.F00532 2.0kb upstream 2.0kb upstream 2000 false A06: 3182169-3184168 Brassica rapa FPsc
Brara.F00532 2.0kb downstream 2.0kb downstream 5963 true A06: 3184169-3190131 Brassica rapa FPsc
Brara.F00532 2.0kb downstream 2.0kb downstream 2000 false A06: 3188132-3190131 Brassica rapa FPsc
Brara.F00532 5.0kb upstream 5.0kb upstream 8963 true A06: 3179169-3188131 Brassica rapa FPsc
Brara.F00532 5.0kb upstream 5.0kb upstream 5000 false A06: 3179169-3184168 Brassica rapa FPsc
Brara.F00532 5.0kb downstream 5.0kb downstream 8963 true A06: 3184169-3193131 Brassica rapa FPsc
Brara.F00532 5.0kb downstream 5.0kb downstream 5000 false A06: 3188132-3193131 Brassica rapa FPsc
Brara.F00532 10.0kb upstream 10.0kb upstream 13963 true A06: 3174169-3188131 Brassica rapa FPsc
Brara.F00532 10.0kb upstream 10.0kb upstream 10000 false A06: 3174169-3184168 Brassica rapa FPsc
Brara.F00532 10.0kb downstream 10.0kb downstream 13963 true A06: 3184169-3198131 Brassica rapa FPsc
Brara.F00532 10.0kb downstream 10.0kb downstream 10000 false A06: 3188132-3198131 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026552 5273 Angiosperm View MSA
122372347 5261 Brassicaceae View MSA
123834198 5264 Brassicales-Malvales View MSA
124337971 5266 SBM View MSA
124238694 5268 Malvidae View MSA
124050211 5270 Rosid View MSA
123740767 5271 Pentapetalae View MSA
122793676 5272 Eudicot View MSA
121344824 5274 Embryophyte View MSA
123424530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier