Gene : Brara.F00848 B. rapa FPsc v1.3

Defline:  (1 of 9) PTHR13935:SF54 - TRANSCRIPTION FACTOR BHLH118-RELATED Genomic Order:  848
Name:  ? Brara.F00848 Secondary Identifier:  ? PAC:30631649

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00848 0.5kb upstream 0.5kb upstream 1814 true A06: 4776823-4778636 Brassica rapa FPsc
Brara.F00848 0.5kb upstream 0.5kb upstream 500 false A06: 4778137-4778636 Brassica rapa FPsc
Brara.F00848 0.5kb downstream 0.5kb downstream 1814 true A06: 4776323-4778136 Brassica rapa FPsc
Brara.F00848 0.5kb downstream 0.5kb downstream 500 false A06: 4776323-4776822 Brassica rapa FPsc
Brara.F00848 1.0kb upstream 1.0kb upstream 2314 true A06: 4776823-4779136 Brassica rapa FPsc
Brara.F00848 1.0kb upstream 1.0kb upstream 1000 false A06: 4778137-4779136 Brassica rapa FPsc
Brara.F00848 1.0kb downstream 1.0kb downstream 2314 true A06: 4775823-4778136 Brassica rapa FPsc
Brara.F00848 1.0kb downstream 1.0kb downstream 1000 false A06: 4775823-4776822 Brassica rapa FPsc
Brara.F00848 2.0kb upstream 2.0kb upstream 3314 true A06: 4776823-4780136 Brassica rapa FPsc
Brara.F00848 2.0kb upstream 2.0kb upstream 2000 false A06: 4778137-4780136 Brassica rapa FPsc
Brara.F00848 2.0kb downstream 2.0kb downstream 3314 true A06: 4774823-4778136 Brassica rapa FPsc
Brara.F00848 2.0kb downstream 2.0kb downstream 2000 false A06: 4774823-4776822 Brassica rapa FPsc
Brara.F00848 5.0kb upstream 5.0kb upstream 6314 true A06: 4776823-4783136 Brassica rapa FPsc
Brara.F00848 5.0kb upstream 5.0kb upstream 5000 false A06: 4778137-4783136 Brassica rapa FPsc
Brara.F00848 5.0kb downstream 5.0kb downstream 6314 true A06: 4771823-4778136 Brassica rapa FPsc
Brara.F00848 5.0kb downstream 5.0kb downstream 5000 false A06: 4771823-4776822 Brassica rapa FPsc
Brara.F00848 10.0kb upstream 10.0kb upstream 11314 true A06: 4776823-4788136 Brassica rapa FPsc
Brara.F00848 10.0kb upstream 10.0kb upstream 10000 false A06: 4778137-4788136 Brassica rapa FPsc
Brara.F00848 10.0kb downstream 10.0kb downstream 11314 true A06: 4766823-4778136 Brassica rapa FPsc
Brara.F00848 10.0kb downstream 10.0kb downstream 10000 false A06: 4766823-4776822 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378543 5261 Brassicaceae View MSA
123837803 5264 Brassicales-Malvales View MSA
124351097 5266 SBM View MSA
124249323 5268 Malvidae View MSA
124073139 5270 Rosid View MSA
123750941 5271 Pentapetalae View MSA
122792125 5272 Eudicot View MSA
122050150 5273 Angiosperm View MSA
121311764 5274 Embryophyte View MSA
123349017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier