Gene : Brara.F00785 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE Genomic Order:  785
Name:  ? Brara.F00785 Secondary Identifier:  ? PAC:30629985
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLYCOGENSYNTH-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-622 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00785 0.5kb upstream 0.5kb upstream 5231 true A06: 4380942-4386172 Brassica rapa FPsc
Brara.F00785 0.5kb upstream 0.5kb upstream 500 false A06: 4380942-4381441 Brassica rapa FPsc
Brara.F00785 0.5kb downstream 0.5kb downstream 5231 true A06: 4381442-4386672 Brassica rapa FPsc
Brara.F00785 0.5kb downstream 0.5kb downstream 500 false A06: 4386173-4386672 Brassica rapa FPsc
Brara.F00785 1.0kb upstream 1.0kb upstream 5731 true A06: 4380442-4386172 Brassica rapa FPsc
Brara.F00785 1.0kb upstream 1.0kb upstream 1000 false A06: 4380442-4381441 Brassica rapa FPsc
Brara.F00785 1.0kb downstream 1.0kb downstream 5731 true A06: 4381442-4387172 Brassica rapa FPsc
Brara.F00785 1.0kb downstream 1.0kb downstream 1000 false A06: 4386173-4387172 Brassica rapa FPsc
Brara.F00785 2.0kb upstream 2.0kb upstream 6731 true A06: 4379442-4386172 Brassica rapa FPsc
Brara.F00785 2.0kb upstream 2.0kb upstream 2000 false A06: 4379442-4381441 Brassica rapa FPsc
Brara.F00785 2.0kb downstream 2.0kb downstream 6731 true A06: 4381442-4388172 Brassica rapa FPsc
Brara.F00785 2.0kb downstream 2.0kb downstream 2000 false A06: 4386173-4388172 Brassica rapa FPsc
Brara.F00785 5.0kb upstream 5.0kb upstream 9731 true A06: 4376442-4386172 Brassica rapa FPsc
Brara.F00785 5.0kb upstream 5.0kb upstream 5000 false A06: 4376442-4381441 Brassica rapa FPsc
Brara.F00785 5.0kb downstream 5.0kb downstream 9731 true A06: 4381442-4391172 Brassica rapa FPsc
Brara.F00785 5.0kb downstream 5.0kb downstream 5000 false A06: 4386173-4391172 Brassica rapa FPsc
Brara.F00785 10.0kb upstream 10.0kb upstream 14731 true A06: 4371442-4386172 Brassica rapa FPsc
Brara.F00785 10.0kb upstream 10.0kb upstream 10000 false A06: 4371442-4381441 Brassica rapa FPsc
Brara.F00785 10.0kb downstream 10.0kb downstream 14731 true A06: 4381442-4396172 Brassica rapa FPsc
Brara.F00785 10.0kb downstream 10.0kb downstream 10000 false A06: 4386173-4396172 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377604 5261 Brassicaceae View MSA
123833630 5264 Brassicales-Malvales View MSA
124343791 5266 SBM View MSA
124237456 5268 Malvidae View MSA
124067154 5270 Rosid View MSA
123741369 5271 Pentapetalae View MSA
122793613 5272 Eudicot View MSA
122044782 5273 Angiosperm View MSA
121310340 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier